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. 2015 Dec 22;113(1):224–229. doi: 10.1073/pnas.1511437113

Table S1.

Oligonucleotide primers used in this work

Assays Destination products Templet Primer name Primer sequence
Transformation p1300-PIF4-TAP TAP TAP-F 5′-CCGGGGATCCTCTAGAGGTGAACAAAAGTTGATTTCTGAA-3′
TAP-R 5′-GATCCTGCAGGTCGACTCACTTGTCATCGTCATCCTTG’
PIF4 PIF4-F 5′-TCCCCCCGGGATGGAACACCAAGGTTGGAG-3′
PIF4-R 5′-TGCTCTAGAGTGGTCCAAACGAGAACCG-3′
Dual-LUC pGreen-0800-YUC8p YUC8 promoter YUC8-F 5′-CCGCTCGAGATTAGGAGTAAACAAGAAGCAAGG-3′
YUC8-R 5′-CGCGGATCCTCTTTTTTTATAAGTTTCTTTAATAAGTATT-3′
pHBT-PIF4 PIF4 PIF4-F 5′-GAGGCGCGCCGGATCCATGGAACACCAAGGTTGGAG-3′
PIF4-R 5′-GCACTCCCATGGATCCGTGGTCCAAACGAGAACCG-3′
qRT-PCR IAA19 IAA19-F 5′-GGTGACAACTGCGAATACGTTACCA-3′
IAA19-R 5′-CCCGGTAGCATCCGATCTTTTCA-3′
IAA29 IAA29-F 5′-CACGGCGATGAACAACAACATAT-3′
IAA29-R 5′-CTCTGTCGCAATCTTCATATTCG-3′
CRY1 CRY1-F 5′-CTCTAAGAACCGCAGAAAAGCC-3′
CRY1-R 5′-CTTTTCTCACACTCACTTCCCCA-3′
YUC1 YUC1-F 5′-TGGAGAGTAAAGACTCATGAT-3′
YUC1-R 5′-GTACTCACTCGCGTGAACGAT-3′
YUC2 YUC2-F 5′-GGTGACACGGATCGGTTAGGGT-3′
YUC2-R 5′-TGCCGAATAATGCATTACCCGT-3′
YUC4 YUC4-F 5′-TTATGGCAAAAAAGAACCTACGAC-3′
YUC4-R 5′-GGAAGTTTTTAGGGAAAGGCAT-3′
YUC5 YUC5-F 5′-TTCAACGAGTGTGTCCAGTCTGCT-3′
YUC5-R 5′-TCTCTGGAACAACTTTCTCCGCGT-3′
YUC6 YUC6-F 5′-GGGCTGTCCATGTTCTTACTGAA-3′
YUC6-R 5′-CGGGAAACAACCAAAAGGAA-3′
YUC8 YUC8-F 5′-TGTATGCGGTTGGGTTTACGAGGA-3′
YUC8-R 5′-CCTTGAGCGTTTCGTGGGTTGTTT-3′
YUC9 YUC9-F 5′-CCTGCAATCAAACAGTTCTCGCGT-3′
YUC9-R 5′-TGAAGCCAAGAAGGGACGTTGCTA-3′
YUC10 YUC10-F 5′-TTCTGAAGTATGCTCCAGTGGCGA-3′
YUC10-R 5′-GTTTGGTGGCGAAAGGACCTTGTT-3′
ACT7 ACT7-F 5′-AGGCACCTCTTAACCCTAAAGC-3′
ACT7-R 5′-GGACAACGGAATCTCTCAGC-3′
ChIP YUC8 YUC8-F 5′-GGGAATGGGTTTGATGTGGAATT-3′
IAA19 YUC8-R 5′-GAGAAGGGAAGTGATGGAATTAG-3′
IAA19-F1 5′-GATATCAAATGACTCCACGTGTC-3′
IAA19-R1 5′-TCCGTGAAAGCTCTCTTCTTCAT-3′
IAA19-F2 5′-GGTGCTACAAATGTCGTTTGGTA-3′
IAA19-R2 5′-GATGGGGTTTAGAGGACGTAGGG-3′
IAA29 IAA29-F 5′-CTCACTACCTTTCGCTTAACGTG-3′
IAA29-R 5′-GTAGTATGTAAATCTAGACCCAA-3′
ACT2 ACT2-F 5′-CGTTTCGCTTTCCTTAGTGTTAGCT-3′
ACT2-R 5′-CACAACGCATGCTAAACAGATCTAG-3′
Pull down pCold-TF PIF4 PIF4-F 5′-CCGGAATTCATGGAACACCAAGGTTGGAG-3′
PIF4-R 5′-CGCGTCGACCTAGTGGTCCAAACGAGAACC-3′
pGEX4T1 PIF3 PIF3-F 5′-CCGGAATTCATGCCTCTGTTTGAGCTTTTC-3′
PIF3-R 5′-CCGCTCGAGTCACGACGATCCACAAAACT-3′
pFastBac HTA CRY1 CRY1-F 5′-CCGGAATTCATGTCTGGTTCTGTATCTGGTTG-3′
CRY1-R 5′-CCGCTCGAGTTACCCGGTTTGTGAAAGC-3′
EMSA YUC8-F 5′-CTCATCCTCTCCACGTGGCTTCCATTCCACGTCATCTTTTTCTTCCC-3′
YUC8-R 5′-CGAGAGGAAGCCACGTGGGGAAGAAAAAGATGACGTGGAATGGAAGC-3′