Table 2.

Sequencing methods used for finished quality lactococcal and streptococcal genomes available from the NCBI (correct January 2014)

Organism	GenBank accession	Sequencing technology	Year	Reference
L. lactis
ssp. lactis IL1403	GCA_000006865.1	Sanger	2001	Bolotin et al. 2001
ssp. cremoris SK11	GCA_000014545.1	Sanger	2006	Makarova et al. 2006
ssp. cremoris MG1363	GCA_000009425.1	Sanger	2007	Wegmann et al. 2007
ssp. lactis KF147	GCA_000025045.1	Combined 454-pyrosequencing & Illumina	2009	Siezen et al. 2010
ssp. cremoris NZ9000	GCA_000143205.1	Illumina	2010	Linares et al. 2010
ssp. cremoris A76	GCA_000236475.1	Sanger	2011	Bolotin et al. 2012
ssp. lactis CV56	GCA_000192705.1	454-pyrosequencing	2011	Gao et al. 2011
ssp. lactis IO-1	GCA_000344575.1	Sanger	2012	Kato et al. 2012
ssp. cremoris UC509.9	GCA_000312685.1	Combined 454-pyrosequencing & Illumina	2012	Ainsworth et al. 2013
ssp. cremoris KW2	GCA_000468955.1	454-pyrosequencing	2013	Kelly et al. 2013
ssp. lactis KLDS 4.0325	GCA_000479375.1	Illumina	2013	Yang et al. 2013
ssp. lactis NCDO 2118	GCA_000478255.2	SOLiD, Ion PGM & Ion Torrent PGM	2014	Oliveira et al. 2014
ssp. lactis SO	GCA_000807375.1	Ion Torrent PGM	2014	McCulloch et al. 2014
ssp. lactis AI06	GCA_000761115.1	454-pyrosequencing	2014	Unpublished
S. thermophilus
CNRZ1066	GCA_000011845.1	Sanger	2004	Bolotin et al. 2004
LMG 18311	GCA_000011825.1	Sanger	2004	Bolotin et al. 2004
LMD-9	GCA_000014485.1	Sanger	2006	Makarova et al. 2006
ND03	GCA_000182875.1	Combined 454-pyrosequencing & Illumina	2010	Sun et al. 2011
JIM 8232	GCA_000253395.1	Sanger & SOLiD	2011	Delorme et al. 2011
MN-ZLW-002	GCA_000262675.1	Combined 454-pyrosequencing & Illumina	2012	Kang et al. 2012
ASCC 1275	GCA_000698885.1	454-pyrosequencing	2014	Wu et al. 2014