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. 2015 Apr 9;35:148–165. doi: 10.3767/003158515X687993

Table 3.

Data partitions, including number of nucleotides, variable uninformative characters (VC), parsimony informative characters (PIC) and percent PIC.

Datasets No. of sequences Total characters VC PIC Percent PIC1, 2 (%)
LSU rDNA 89 938 40 239 25.48
RPB1, all sites 73 724 64 210 29.01
RPB1, 1 and 2 codons 73 398 20 46 21.90
RPB1, 3 codons 73 198 32 134 63.81
RPB1 introns 73 128 12 30 14.29
RPB2, all sites 81 1820 106 506 27.80
RPB2, 1 and 2 codons 81 1118 21 43 8.50
RPB2, 3 codons 81 558 69 401 79.25
RPB2 introns 81 144 16 62 12.25
EF-1α, all sites 80 1395 61 412 29.53
EF-1α, 1 and 2 codons 80 777 10 34 8.25
EF-1α, 3 codons 80 388 36 231 56.07
EF-1α, introns 80 230 15 147 35.68
Combined 4 genes 89 4877 271 1367 28.03

1 For datasets including all sites: percent PIC out of total number of characters in individual datasets.

2 For datasets per codon positions and introns: percent PIC out of total number of PIC in individual datasets including all sites.