Table 1. Apis mellifera mRNA and small RNA composition in each sequenced sample.
Number of reads | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Total (Raw data) | mapped | microRNA | Annoted genes (A. mellifera) | Noncode | rRNA | tRNA | Pathogens | |||
mRNA libraries | Mature Oocyte | 82208246 | 47939930 | 291 | 47780988 | 120439 | 7385 | 30 | 30797 | |
Diploid Embryos | 0-2h | 22902101 | 15502664 | 84 | 15492088 | 7622 | 334 | 2 | 2534 | |
0-6h | 40486094 | 26661385 | 177 | 26619330 | 35564 | 598 | 6 | 5710 | ||
0-24h | 33295431 | 20751326 | 431 | 20631201 | 101424 | 1219 | 9 | 17042 | ||
Haploid Embryos | 0-2h | 17417565 | 11526057 | 44 | 11515606 | 7407 | 439 | 3 | 2558 | |
0-6h | 37086884 | 23655878 | 188 | 23623252 | 28863 | 374 | 8 | 3193 | ||
0-24h | 163202336 | 87698424 | 1812 | 87258581 | 308725 | 39799 | 65 | 89442 | ||
Small RNA Libraries | Mature Oocyte | 32955026 | 898309 | 6256 | 1995689 | 928113 | 14165 | 1199 | 251353 | |
Diploid Embryos | 0-2h | 17060175 | 1249412 | 6879 | 176645 | 97534 | 442 | 87 | 5689 | |
0-6h | 37487408 | 287276 | 6386 | 230815 | 65112 | 323 | 189 | 11023 | ||
0-24h | 40213259 | 333157 | 25588 | 235739 | 54577 | 314 | 394 | 16545 | ||
Haploid Embryos | 0-2h | 9899631 | 10921 | 171 | 7245 | 3273 | 14 | 0 | 218 | |
0-6h | 38030892 | 118550 | 1611 | 88706 | 23682 | 120 | 122 | 4309 | ||
0-24h | 32219748 | 733618 | 27115 | 500389 | 191466 | 798 | 115 | 13735 |