GenBank accession numbers for Dipsadinae and outgroup species analyzed here.
Species | 12S | 16S | CYTB | ND4 | CMOS |
---|---|---|---|---|---|
Adelphicos quadrivirgatum | - | - | GQ895853 | - | GQ895796 |
Alsophis antiguae | AF158455 | AF158524 | - | - | - |
Alsophis antillensis | FJ416691 | FJ416702 | FJ416726 | FJ416800 | - |
Alsophis manselli | - | AF158528 | FJ416727 | FJ416801 | - |
Alsophis rijgersmaei | FJ416697 | FJ416708 | FJ416729 | FJ416803 | - |
Alsophis rufiventris | FJ416698 | FJ416709 | FJ416730 | FJ416804 | - |
Alsophis sajdaki | - | - | FJ416731 | FJ416805 | - |
Alsophis sibonius | FJ416692 | FJ416703 | FJ416728 | FJ416802 | - |
Amastridium sapperi | - | - | GQ334479 | GQ334580 | - |
Apostolepis albicollaris | JQ598793 | JQ598856 | - | - | JQ598965 |
Apostolepis assimilis | GQ457781 | GQ457724 | - | - | GQ457843 |
Apostolepis cearensis | JQ598794 | JQ598857 | - | - | JQ598966 |
Apostolepis dimidiata | GQ457782 | GQ457725 | JQ598917 | - | GQ457844 |
Apostolepis flavotorquata | JQ598795 | JQ598858 | GQ895854 | - | GQ895798 |
Arrhyton dolichura | AF158438 | AF158507 | FJ416721 | FJ416795 | - |
Arrhyton procerum | AF158452 | AF158521 | FJ416723 | FJ416797 | - |
Arrhyton redimitum | AF158439 | AF158508 | FJ416720 | FJ416794 | - |
Arrhyton supernum | AF158436 | AF158505 | FJ416718 | FJ416792 | - |
Arrhyton taeniatum | AF158453 | AF158522 | FJ416717 | FJ416791 | - |
Arrhyton tanyplectum | AF158446 | AF158516 | FJ416722 | FJ416796 | - |
Arrhyton vittatum | AF158437 | AF158506 | FJ416719 | FJ416793 | - |
Atractus aff. iridescens MZUTI4122 | - | KT944037 | KT944049 | KT944056 | - |
Atractus albuquerquei | GQ457783 | GQ457726 | JQ598918 | - | GQ457845 |
Atractus badius | AF158425 | AF158485 | - | - | - |
Atractus duboisi MZUTI62 | - | KT944041 | - | KT944059 | - |
Atractus dunni MZUTI2650 | - | KT944038 | KT944050 | KT944057 | - |
Atractus elaps | - | - | EF078536 | EF078584 | - |
Atractus flammigerus | AF158402 | AF158471 | - | - | - |
Atractus gigas MZUTI3286 | - | KT944043 | KT944053 | KT944061 | - |
Atractus iridescens MZUTI3758 | - | - | KT944052 | - | - |
Atractus iridescens MZUTI3759 | - | KT944039 | KT944051 | KT944058 | - |
Atractus major ANF1545 | - | KT944045 | - | - | - |
Atractus resplendens MZUTI3996 | KT944036 | KT944042 | KT944055 | KT944060 | - |
Atractus reticulatus | JQ598798 | JQ598886 | - | - | JQ598970 |
Atractus schach | JQ598799 | AF158486 | - | - | JQ598971 |
Atractus sp. MZUTI4178 | - | KT944040 | - | - | KT944066 |
Atractus trihedrurus | GQ457784 | GQ457727 | JQ598919 | - | GQ457846 |
Atractus typhon MZUTI3284 | - | KT944044 | KT944054 | KT944062 | - |
Atractus wagleri | - | - | GQ334480 | GQ334581 | - |
Atractus zebrinus | JQ598800 | JQ598861 | - | - | JQ598972 |
Atractus zidoki | AF158426 | AF158487 | - | - | - |
Boiruna maculata | GQ457785 | JQ598862 | GQ895855 | - | GQ895799 |
Borikenophis portoricensis | FJ416696 | AF158517 | AF471085 | U49308 | AF471126 |
Borikenophis variegatus | FJ416700 | FJ416711 | FJ416734 | FJ416808 | - |
Caaeteboia amarali | GQ457807 | GQ457747 | JQ598921 | - | GQ457867 |
Calamodontophis paucidens | GQ457786 | GQ457728 | - | - | GQ457848 |
Caraiba andreae | AF158442 | AF158511 | FJ416743 | FJ416817 | - |
Carphophis amoenus | AY577013 | AY577022 | AF471067 | - | DQ112082 |
Carphophis vermis | - | - | KP765656 | - | - |
Clelia clelia | AF158403 | AF158472 | - | - | JQ598973 |
Coluber constrictor | L01765 | L01770 | EU180432 | AY487040 | AY486937 |
Coniophanes fissidens | - | - | EF078538 | EF078586 | - |
Conophis lineatus | GQ457788 | JQ598865 | JQ598924 | - | JQ598975 |
Conophis vittatus | - | - | GQ895861 | - | GQ895805 |
Contia longicaudae | - | - | GU112407 | GU112427 | - |
Contia tenuis | AY577021 | AY577030 | GU112401 | AF402658 | AF471134 |
Crisantophis nevermanni | GU018152 | GU018169 | - | - | - |
Cryophis hallbergi | - | - | GQ895863 | EF078544 | GQ895807 |
Cubophis cantherigerus | AF158405 | AF158475 | AF544669 | FJ416818 | AF544694 |
Cubophis caymanus | FJ416693 | FJ416704 | FJ416745 | FJ416820 | - |
Cubophis fuscicauda | FJ416695 | FJ416706 | FJ416747 | FJ416822 | - |
Cubophis ruttyi | FJ416699 | FJ416710 | FJ416746 | FJ416821 | - |
Cubophis vudii | AF158443 | AF158512 | FJ416744 | FJ416819 | - |
Diadophis punctatus | AF544765 | AY577024 | EU193700 | EU193987 | AF471122 |
Diaphorolepis wagneri MZUTI3322 | - | KR814752 | - | KR814775 | KR814764 |
Diaphorolepis wagneri MZUTI3752 | - | KR814753 | - | KR814777 | KR814766 |
Diaphorolepis wagneri MZUTI3901 | - | KR814754 | - | KR814778 | KR814767 |
Dipsas albifrons | JQ598803 | JQ598866 | JQ598925 | - | - |
Dipsas articulata | JQ598804 | JQ598867 | - | - | - |
Dipsas catesbyi | JQ598805 | Z46496 | JQ598926 | EF078585 | JQ598977 |
Dipsas indica | GQ457789 | GQ457730 | - | - | GQ457850 |
Dipsas neivai | GQ457790 | GQ457731 | - | - | GQ457851 |
Dipsas pratti | - | - | GQ334482 | GQ334583 | - |
Dipsas variegata | AF158406 | AF158476 | - | - | - |
Drepanoides anomalus | GQ457791 | GQ457732 | GQ895866 | - | GQ895810 |
Echinanthera melanostigma | JQ598806 | GU018174 | JQ598928 | - | - |
Echinanthera undulata | JQ598807 | JQ598870 | JQ598929 | - | JQ598978 |
Elapomorphus quinquelineatus | GQ457794 | GQ457735 | JQ598930 | - | GQ457855 |
Erythrolamprus aesculapii | GQ457795 | GQ457736 | GQ895871 | - | GQ895814 |
Erythrolamprus almadensis | JQ598808 | JQ598871 | - | - | JQ598979 |
Erythrolamprus atraventer | JQ598809 | JQ598872 | - | - | JQ598980 |
Erythrolamprus breviceps | AF158464 | AF158533 | - | - | - |
Erythrolamprus ceii | JQ598810 | JQ598873 | - | - | JQ598981 |
Erythrolamprus cursor | JX905310 | JX905314 | - | - | - |
Erythrolamprus epinephelus | GU018158 | GU018176 | - | - | - |
Erythrolamprus jaegeri | GQ457809 | GQ457749 | - | - | GQ457869 |
Erythrolamprus juliae | AF158445 | AF158514 | - | - | - |
Erythrolamprus miliaris | JQ598811 | AF158480 | JQ598931 | - | JQ598982 |
Erythrolamprus mimus | GU018157 | GU018175 | - | - | - |
Erythrolamprus poecilogyrus | JQ598812 | JQ598875 | - | - | - |
Erythrolamprus pygmaeus | GU018154 | GU018172 | - | - | - |
Erythrolamprus reginae | JQ598813 | JQ598876 | - | - | JQ598983 |
Erythrolamprus typhlus | GQ457811 | GQ457751 | - | - | GQ457871 |
Farancia abacura | Z46467 | Z46491 | U69832 | DQ902307 | AF471141 |
Farancia erytrogramma | AY577017 | AY577026 | KP765663 | - | - |
Geophis carinosus | - | - | GQ895872 | - | GQ895815 |
Geophis dubius | - | - | KC917319 | - | - |
Geophis godmani | JQ598814 | JQ598877 | JQ598932 | - | - |
Geophis juarezi | - | - | KC917315 | - | - |
Geophis latifrontalis | - | - | KC917322 | - | - |
Geophis occabus | - | - | KC917323 | - | - |
Geophis turbidus | - | - | KC917321 | - | - |
Gomesophis brasiliensis | GQ457796 | GQ457737 | - | - | - |
Haitiophis anomalus | FJ666091 | FJ666092 | - | - | - |
Helicops angulatus | GQ457797 | GQ457738 | AF471037 | - | AF471160 |
Helicops carinicaudus | JQ598815 | - | - | - | JQ598984 |
Helicops gomesi | GQ457798 | GQ457739 | - | - | GQ457858 |
Helicops hagmanni | JQ598816 | JQ598878 | - | - | JQ598985 |
Helicops infrataeniatus | GQ457799 | GQ457740 | JQ598933 | - | GQ457859 |
Heterodon nasicus | GQ457801 | AY577027 | KP765664 | - | GQ457861 |
Heterodon platirhinos | AY577019 | AY577028 | GU112412 | AF402659 | JQ598986 |
Heterodon simus | AY577020 | AY577029 | AF217840 | DQ902310 | AF471142 |
Hydrodynastes bicinctus | GQ457802 | GQ457742 | JQ598935 | - | GQ457862 |
Hydrodynastes gigas | GQ457803 | GQ457743 | GQ895873 | - | GQ895816 |
Hydromorphus concolor | - | - | GQ895874 | - | GQ895817 |
Hydrops triangularis | GQ457804 | GQ457744 | AF471039 | - | AF471158 |
Hypsiglena affinis | - | - | GU353241 | EU363055 | - |
Hypsiglena chlorophaea | EU728577 | EU728577 | EU728577 | EU728577 | - |
Hypsiglena jani | EU728592 | EU728592 | EU728592 | EU728592 | - |
Hypsiglena ochrorhyncha | EU728578 | EU728578 | EU728578 | EU728578 | - |
Hypsiglena slevini | EU728584 | EU728584 | EU728584 | EU728584 | - |
Hypsiglena tanzeri | - | - | EU728588 | EU363044 | - |
Hypsiglena torquata | EU728591 | EU728591 | EU728591 | EU728591 | AF471159 |
Hypsirhynchus callilaemus | AF158440 | AF158509 | FJ416737 | FJ416811 | - |
Hypsirhynchus ferox | AF158447 | AF158515 | GQ895875 | FJ416816 | GQ895818 |
Hypsirhynchus funereus | AF158451 | AF158520 | FJ416739 | FJ416813 | - |
Hypsirhynchus parvifrons | AF158441 | AF158510 | FJ416740 | FJ416814 | - |
Hypsirhynchus polylepis | AF158450 | AF158519 | FJ416738 | FJ416812 | - |
Hypsirhynchus scalaris | AF158449 | AF158518 | FJ416741 | FJ416815 | - |
Ialtris dorsalis | AF158456 | AF158525 | FJ416735 | FJ416809 | - |
Ialtris haetianus | AF158458 | AF158527 | FJ416736 | FJ416810 | - |
Imantodes cenchoa | EU728586 | EU728586 | EU728586 | EU728586 | GQ457865 |
Imantodes chocoensis | - | - | KC176250 | - | - |
Imantodes gemmistratus | - | - | GQ334487 | EF078557 | - |
Imantodes inornatus | - | - | GQ334489 | EF078559 | - |
Imantodes lentiferus | AF158463 | AF158532 | KC176252 | EF078561 | - |
Leptodeira annulata | GQ457806 | GQ457746 | FJ416713 | FJ416787 | AF544690 |
Leptodeira bakeri | - | - | GQ334518 | GQ334618 | - |
Leptodeira frenata | - | - | EF078532 | EF078580 | - |
Leptodeira maculata | - | - | GQ334524 | GQ334623 | - |
Leptodeira nigrofasciata | - | - | GQ334526 | EF078581 | - |
Leptodeira polysticta | EU728590 | EU728590 | EU728590 | EU728590 | - |
Leptodeira punctata | - | - | EF078530 | EF078577 | - |
Leptodeira rubricata | - | - | GQ334527 | GQ334631 | - |
Leptodeira septentrionalis | GU018148 | GU018163 | KC176243 | KC176255 | - |
Leptodeira splendida | - | - | EF078521 | EF078569 | - |
Leptodeira uribei | - | - | EF078531 | EF078579 | - |
Lygophis anomalus | JQ598817 | JQ598879 | - | - | - |
Lygophis elegantissimus | GQ457808 | GQ457748 | - | - | GQ457868 |
Lygophis flavifrenatus | JQ598818 | JQ598880 | - | - | - |
Lygophis lineatus | - | - | - | - | DQ469789 |
Lygophis meridionalis | GQ457810 | GQ457750 | - | - | GQ457870 |
Lygophis paucidens | JQ598819 | - | - | - | JQ598987 |
Magliophis exiguum | FJ416694 | AF158526 | AF471071 | FJ416798 | AF471117 |
Magliophis stahli | - | - | FJ416725 | FJ416799 | - |
Manolepis putnami | JQ598820 | JQ598881 | JQ598936 | - | JQ598988 |
Mussurana bicolor | GQ457787 | GQ457729 | - | - | GQ457849 |
Ninia atrata | GQ457814 | JQ598882 | JQ598937 | GQ334659 | GQ457874 |
Nothopsis rugosus ASL493 | GU018159 | GU018177 | - | - | - |
Nothopsis rugosus MZUTI3682 | - | KR814760 | KR814770 | KR814779 | KR814768 |
Oxyrhopus clathratus | GQ457815 | GQ457754 | - | - | GQ457875 |
Oxyrhopus formosus | JQ598821 | AF158482 | - | - | - |
Oxyrhopus guibei | JQ598822 | JQ627291 | JQ598938 | - | JQ598989 |
Oxyrhopus melanogenys | JQ598823 | AF158489 | - | - | JQ598990 |
Oxyrhopus petolarius | GU018144 | GU018170 | GQ334554 | GQ334660 | - |
Oxyrhopus rhombifer | GQ457816 | GQ457755 | - | - | GQ457876 |
Oxyrhopus trigeminus | JQ598824 | JQ598884 | JQ598939 | - | - |
Paraphimophis rusticus | JQ598802 | JQ598864 | JQ598923 | - | JQ598974 |
Phalotris bilineatus | JQ598827 | JQ598887 | JQ598943 | - | - |
Phalotris lativittatus | JQ598825 | JQ598885 | - | - | JQ598991 |
Phalotris lemniscatus | GQ457817 | GQ457756 | JQ598941 | - | GQ457877 |
Phalotris mertensi | JQ598826 | - | - | - | - |
Phalotris nasutus | GQ457818 | GQ457757 | GQ895880 | - | GQ895822 |
Philodryas aestiva | GQ457819 | GQ457758 | - | - | GQ457879 |
Philodryas agassizii | GQ457823 | GQ457762 | GQ895883 | - | GQ457883 |
Philodryas argentea | GQ457842 | GQ457780 | JQ598944 | - | GQ457899 |
Philodryas baroni | JQ598828 | JQ598888 | - | - | - |
Philodryas georgeboulengeri | - | - | GQ895898 | - | GQ895838 |
Philodryas mattogrossensis | GQ457820 | GQ457759 | - | - | GQ457880 |
Philodryas nattereri | JQ598829 | JQ598889 | AF236806 | - | JQ598992 |
Philodryas olfersii | JQ598830 | AF158484 | JQ598945 | - | JQ598993 |
Philodryas patagoniensis | GQ457821 | JQ627296 | AF236808 | - | GQ457881 |
Philodryas psammophidea | GU018149 | GU018168 | - | - | - |
Philodryas viridissima | AF158419 | AF158474 | AF236807 | - | - |
Phimophis guerini | GQ457822 | GQ457761 | - | - | GQ457882 |
Pseudalsophis dorsalis | JQ598832 | JQ598892 | JQ598946 | - | JQ598994 |
Pseudalsophis elegans | AF158401 | AF158470 | JQ598947 | - | JQ598995 |
Pseudoboa coronata | GQ457824 | GQ457763 | - | - | GQ457884 |
Pseudoboa neuwiedii | AF158423 | AF158490 | GQ895884 | - | GQ895825 |
Pseudoboa nigra | AF544775 | GQ457764 | JQ598948 | - | AF544729 |
Pseudoeryx plicatilis | GQ457826 | GQ457765 | GQ895885 | - | GQ895826 |
Pseudoleptodeira latifasciata | EU728579 | EU728579 | EU728579 | EU728579 | - |
Pseudotomodon trigonatus | GQ457827 | GQ457766 | - | - | GQ457887 |
Psomophis genimaculatus | GQ457828 | GQ457767 | - | - | GQ457888 |
Psomophis joberti | GQ457829 | GQ457768 | GQ895887 | - | GQ895828 |
Psomophis obtusus | JQ598836 | JQ598896 | - | - | - |
Ptychophis flavovirgatus | GQ457830 | GQ457769 | - | - | GQ457890 |
Rhachidelus brazili | JQ598837 | JQ598897 | JQ598952 | - | - |
Rhadinaea flavilata | - | - | AF471078 | - | AF471152 |
Rhadinaea fulvivittis | - | - | EF078539 | EF078587 | - |
Rodriguesophis iglesiasi | JQ598831 | JQ598891 | GQ895881 | - | GQ895823 |
Sibon nebulatus | EU728583 | EU728583 | EU728583 | EU728583 | AF544736 |
Sibon noalamina | - | KP209376 | - | - | - |
Sibynomorphus mikanii | GQ457832 | JQ627297 | JQ598954 | - | GQ457892 |
Sibynomorphus neuwiedi | JQ598838 | JQ598898 | - | - | - |
Sibynomorphus turgidus | JQ598839 | JQ598899 | - | - | - |
Sibynomorphus ventrimaculatus | JQ598840 | JQ598900 | - | - | JQ598997 |
Siphlophis cervinus | JQ598841 | JQ598901 | GQ895888 | - | JQ598998 |
Siphlophis compressus | GQ457833 | GQ457772 | - | - | GQ457893 |
Siphlophis longicaudatus | JQ598842 | JQ598902 | - | - | JQ598999 |
Siphlophis pulcher | GQ457834 | GQ457773 | JQ598955 | - | GQ457894 |
Sordellina punctata | JQ598843 | JQ598903 | JQ598956 | - | JQ599000 |
Stichophanes ningshaanensis | KJ719252 | KJ719252 | KJ719252 | KJ719252 | KJ638718 |
Synophis bicolor MZUTI4180 | - | KT944048 | - | KT944065 | KT944069 |
Synophis bicolor MHUA14577 | KR814751 | KR814758 | KR814773 | - | KR814769 |
Synophis bicolor MZUTI3529 | - | KR814759 | KR814771 | KR814780 | KR814762 |
Synophis bicolor MZUTI4175 | - | KT944046 | - | KT944063 | KT944067 |
Synophis bicolor UTA R-55956 | - | - | JX398697 | JX398557 | - |
Synophis calamitus KU197107 | KR814622 | KR814640 | KR814697 | KR814711 | KR814663 |
Synophis calamitus MZUTI3694 | - | KR814755 | KR814772 | KR814774 | KR814765 |
Synophis lasallei MZUTI4181 | - | KT944047 | - | KT944064 | KT944068 |
Synophis zaheri MZUTI3353 | - | KR814756 | - | KR814776 | KR814761 |
Synophis zaheri MZUTI3355 | - | KR814757 | - | KR814781 | KR814763 |
Tachymenis peruviana | GQ457835 | GQ457774 | - | - | GQ457895 |
Taeniophallus affinis | JQ598844 | JQ598905 | JQ598957 | - | GQ457853 |
Taeniophallus brevirostris | GQ457793 | GQ457734 | JQ598958 | - | GQ457854 |
Taeniophallus nicagus | JQ598845 | JQ598906 | - | - | JQ599001 |
Tantalophis discolor | - | - | EF078541 | EF078589 | - |
Thalesius viridis | AF158468 | AF158538 | - | - | - |
Thamnodynastes hypoconia | JQ598846 | - | - | - | - |
Thamnodynastes lanei | GQ457836 | GQ457775 | - | - | - |
Thamnodynastes pallidus | GU018155 | GU018166 | - | - | - |
Thamnodynastes rutilus | GQ457837 | GQ457776 | - | - | GQ457896 |
Thamnodynastes strigatus | JQ598847 | JQ598907 | JQ598959 | - | - |
Thermophis baileyi | - | - | EU864148 | KF595097 | EU496922 |
Thermophis zhaoermii | GQ166168 | GQ166168 | GQ166168 | GQ166168 | KF514882 |
Tomodon dorsatum | GQ457838 | GQ457777 | GQ895892 | - | GQ895833 |
Tretanorhinus nigroluteus | - | - | GQ895893 | - | GQ895834 |
Trimetopon gracile | GU018160 | GU018178 | - | - | - |
Tropidodipsas sartorii | - | - | EF078540 | EF078588 | - |
Tropidodryas serra | JQ598848 | JQ598908 | JQ598961 | - | - |
Tropidodryas striaticeps | GQ457839 | GQ457778 | AF236811 | - | - |
Uromacer catesbyi | AF158454 | AF158523 | FJ416714 | FJ416788 | - |
Uromacer frenatus | AF158444 | AF158513 | FJ416715 | FJ416789 | - |
Uromacer oxyrhynchus | FJ416701 | FJ416712 | FJ416716 | FJ416790 | - |
Xenodon dorbignyi | GQ457812 | GQ457752 | - | - | GQ457872 |
Xenodon guentheri | JQ598849 | JQ598909 | - | - | - |
Xenodon histricus | GQ457813 | GQ457753 | JQ598962 | - | GQ457873 |
Xenodon matogrossensis | JQ598850 | JQ598910 | - | - | - |
Xenodon merremi | GQ457840 | JQ598911 | JQ598963 | - | GQ457898 |
Xenodon nattereri | JQ598851 | JQ598912 | - | - | - |
Xenodon neuwiedii | GQ457841 | GQ457779 | AF236814 | - | - |
Xenodon pulcher | JQ598852 | JQ598913 | - | - | - |
Xenodon semicinctus | GU018156 | GU018173 | GQ895877 | - | - |
Xenodon severus | JQ598853 | Z46474 | JQ598964 | - | - |
Xenopholis scalaris GFM825 | - | JQ598915 | - | - | - |
Xenopholis scalaris JPV | GU018145 | GU018164 | - | - | - |
Xenopholis scalaris KU222204 | - | - | GQ895897 | - | GQ895837 |
Xenopholis scalaris WED57797 | JQ598854 | - | - | - | JQ599002 |
Xenopholis undulatus R6955 | JQ598855 | JQ598916 | - | - | JQ599003 |