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. 2016 Jan 16;17:35. doi: 10.1186/s12859-016-0885-0

Table 3.

Effects of parameters k and r on LOMBARDE output

No. of arcs No. of valid arcs Ratio
rk 3 5 7 9 3 5 7 9 3 5 7 9
1 24,471 24,471 24,471 24,471 428 428 428 428 1.8 1.8 1.8 1.8
1.2 15,184 14,339 13,093 12,051 385 375 363 369 2.5 2.6 2.8 3.1
1.5 12,204 10,299 8,951 8,059 369 344 338 333 3.0 3.3 3.8 4.1
2 10,294 8,423 7,144 6,453 351 338 325 314 3.4 4.0 4.5 4.9
5 6,379 5,612 4,999 4,955 293 300 294 295 4.6 5.3 5.9 6.0
10 5,958 5,466 4,817 4,922 280 299 289 295 4.7 5.5 6.0 6.0

The total number of arcs and the number of validated arcs in the Lombarde output decrease when k or r increase. When the ratio between these two numbers increased, more confident results were obtained; therefore, k=9 and r=10 gave the most confident results