Table 1.

Summary of the SV40 contigs generated from the representative enriched virus samples

Sample	# of sorted drops	SV40 reads /Total reads (%)	Contig length (bp)	Sequence Coverage (%)	Sequence Identity (bp)	Missing Sequencec (locus)
1-1a	100	94.0	5066	96.6	5066	124–207 1648–1740
1-2	1000	98.6	5162	98.5	5162	125–205
2-1	1000	95.8	5134	97.9	5134	124–232
2-2	5000	98.8	5187	98.9	5186	151–207
3-1b	100	8.9	5159	98.4	5158	124–207
3-2a,b	1000	0.74	5016	95.7	5016	99–232 1648–1740

^aThe sequence reads from these samples lack a large portion of the amplicon sequence (1761–2259 bp).

^bMDA reagents used for these samples are incompletely decontaminated.

^cTwo 72 bp repeats reside in 107–250 bp.