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. 2016 Jan 11;9:223–229. doi: 10.2147/OTT.S91420

Table 1.

PCR primer sequence, annealing temperature, and product size, as well as restriction enzyme used and band sizes obtained after digestion, for genotyping of the polymorphisms

SNP Primer sequence Annealing temperature (°C) PCR product size (bp) Restriction enzyme Genotype (bp) References
rs2243250 5′-TAAACTTGGGAGAACATGGT-3′ 52 195 Avall TT: 195 15
5′-TGGGGAAAGATAGAGTAATA-3′ CT: 195+176+19
CC: 176+19
rs10499563 5′-AGGGAAAGCAGGTTATCAAA-3′ 61 424 Taal TT: 424 16
5′-AGTGGCTTCAGGGAGACTAA-3′ TC: 424+320+104
CC: 320+104
rs4073 5′-ATCTTGTTCTAACACCTGCCACTCT-3′ 59 121 Munl TT: 121 17
5′-TAAAATACTGAAGCTCCACAATTTGG-3′ TA: 121+82+39
AA: 82+39
rs2233406 5′-GGTCCTTAAGGTCCAATCG-3′ 62 200 Bfal CC: 180+20 18
5′-GTTGTGGATACCTTGCACTA-3′ CT: 200+180+20
TT: 200
rs3138053 5′-GGTCCTTAAGGTCCAATCG-3′ 62 200 TspRl AA: 200 18
5′-GTTGTGGATACCTTGCACTA-3′ AG: 200+129+71
GG: 129+71

Abbreviations: PCR, polymerase chain reaction; SNP, single-nucleotide polymorphism.