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. 2016 Jan 19;11(1):e0147205. doi: 10.1371/journal.pone.0147205

Table 4. Models testing effect of growth parameters and neighboring competition on the tree response to the release (number of releases and mean growth change), and the accuracy of coppice detection from tree-ring analysis (expressed by sensitivity and PPP).

Significance was tested in generalized linear models using software R version 3.1.3. Best predictor variables were selected by stepwise model selection by Akaike’s Information Criterion using MASS package in R.

Variables of initial models (No. releases and MGC): MGR; No. neighbors (all, oaks, hornbeam, other); DWBA (all, oaks, hornbeam, other); age
Number of releases Estimate Std. Error t value Pr(>|t|)  
(Intercept) -0.2987461 0.5185749 -0.576 0.5657  
age 0.016471 0.0034024 4.841 4.29E-06 ***
DWBA hornbeam -0.0014463 0.0006678 -2.166 0.0325 *
No. hornbeam 0.0226908 0.0116399 1.949 0.0538 .
        AIC: 328.19  
Model I. for MGC Estimate Std. Error t value Pr(>|t|)  
(Intercept) 7.46E-02 4.22E-02 1.768 0.0799 .
MGR -3.81E-04 1.88E-04 -2.031 0.0447 *
DWBA hornbeam -6.19E-05 2.47E-05 -2.505 0.0137 *
No. all neighbors 7.89E-04 4.40E-04 1.793 0.0757 .
DWBA oak -2.03E-05 1.45E-05 -1.405 0.163  
        AIC: -326.59
Variables of initial model (MGC): MGR; No. neighbors (all, single-stemmed, multi-stemmed); DWBA (all, single-stemmed, multi-stemmed); age
Model II. for MGC Estimate Std. Error t value Pr(>|t|)  
(Intercept) 4.76E-02 2.84E-02 1.676 0.09662 .
DWBA single-stemmed -5.33E-05 1.86E-05 -2.874 0.00487 **
No. single-stemmed 3.03E-03 1.12E-03 2.706 0.00791 **
MGR -2.57E-04 1.75E-04 -1.465 0.14587  
        AIC: -331.18
Variables of initial models (sensitivity and PPP): MGC; No. releases; MGR; No. neighbors (all, oaks, hornbeam, other); DWBA (all, oaks, hornbeam, other); age
Sensitivity Estimate Std. Error t value Pr(>|t|)  
(Intercept) 0.914319 0.208031 4.395 2.60E-05 ***
MGC 2.512293 0.632153 3.974 0.000128 ***
age -0.002966 0.001243 -2.385 0.018825 *
No. oaks -0.006481 0.003534 -1.834 0.069373 .
No. all neighbors 0.003364 0.002191 1.535 0.127586  
  AIC: 104.73  
PPP Estimate Std. Error t value Pr(>|t|)  
(Intercept) 0.548567 0.0638904 8.586 7.02E-14 ***
No. hornbeam 0.0085018 0.0048387 1.757 0.0817 .
MGC 1.2113676 0.7090305 1.708 0.0904 .
DWBA hornbeam -0.0004111 0.0002778 -1.48 0.1418  
        AIC: 132.47  

Signif. codes: 0 ‘***’0.001‘**’0.01‘*’0.05‘.’0.1‘ ‘1.

Abbreviations: DWBA—distance-weighted basal area of neighboring trees; MGC—mean growth change; MGR—mean growth rate; PPP—Positive Predictive Power.