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. 2016 Jan 20;48:4. doi: 10.1186/s12711-016-0182-4

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© Atlija et al. 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Results from the genome-wide association study (GWAS) performed for the two indicator traits of parasite resistance analyzed. Analyzed traits: LFEC Log-transformed faecal egg count, IgA _t Box-Cox-transformed optical density ratio (ODR) values of immunoglobulin A activity. The values of the log(1/P-value) are shown for all the 43,613 SNPs that passed the quality control. For the chromosomes that harbor significant SNP associations, the horizontal lines indicate the 5 % chromosome-wise significance threshold obtained by applying a Bonferroni correction considering the number of independent SNPs analyzed for each chromosome. The genome-wise significance threshold, considering the number of independent markers analyzed for the entire genome is also represented