TABLE 2.
Glycine improves growth rates of ridA strains inhibited by 2AA
Growth mediumb | Growth ratea (h−1) of: |
|||||
---|---|---|---|---|---|---|
DM14828 (Wt) | DM14829 (ridA) | DM14838 (gcvP) | DM14839 (ridA gcvP) | DM14836 (gcvB) | DM14837 (ridA gcvB) | |
Min-glucose | 0.56 | 0.42 | 0.52 | 0.33 | 0.51 | 0.42 |
+Gly | 0.52 | 0.52 | 0.38 | 0.23 | 0.59 | 0.51 |
+Ser | 0.57 | NGc | 0.59 | 0.28d | 0.59 | NG |
+Ser and Gly | 0.60 | 0.34 | 0.58 | 0.18 | 0.59 | NG |
+Cys | 0.50 | NG | 0.54 | NG | 0.57 | NG |
+Cys and Gly | 0.57 | 0.30 | 0.52 | NG | 0.54 | 0.31 |
+Dap | 0.58 | NG | 0.52 | NG | 0.56 | NG |
+Dap and Gly | 0.57 | 0.43 | 0.45 | NG | 0.49 | 0.51 |
Min-pyruvate | 0.41 | NG | 0.40 | NG | 0.44 | NG |
+Gly | 0.42 | 0.33 | 0.35 | NG | 0.41 | 0.35 |
Specific growth rates (μ) were calculated as ln(X/X0)/T, where X represents OD650, X0 is the initial OD650 of the exponential growth period monitored, and T is time in hours. Data are the averages for three independent cultures. The standard deviation was less than 0.05 in all cases. Growth was assessed within 20 h following inoculation. Wt, wild type.
Glucose (11 mM) and pyruvate (50 mM) were provided as the carbon source in minimal media as indicated (Min-glucose and Min-pyruvate, respectively). Amino acid supplements were added at the following final concentrations: 0.67 mM glycine (Gly), 5 mM serine (Ser), 0.25 mM cysteine (Cys), and 0.1 mM diaminopropionate (Dap).
Average growth rates less than 0.05 h−1 were designated as no growth (NG).
The displayed growth rate reflects the secondary growth phase of a biphasic growth pattern; the primary growth rate was 0.06 h−1.