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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2015 Nov 14;71(Pt 12):o941–o942. doi: 10.1107/S2056989015020502

Crystal structure of (E)-N-[(2-meth­oxy­naphthalen-1-yl)methyl­idene]-3-nitro­aniline

Devika Bhai R a,*, C R Girija b, Shalini Suresh c, Ramakrishna Reddy b
PMCID: PMC4719912  PMID: 26870540

Abstract

In the title compound, C18H14N2O3, the dihedral angle between the naphthalene ring system and the benzene ring is 59.99 (13)°. A short intra­molecular C—H⋯N contact closes an S(6) ring. The nitro group is disordered over two orientations in a statistical ratio. In the crystal, weak C—H⋯O hydrogen bonds and very weak π–π stacking inter­actions [centroid–centroid separation = 3.9168 (17) Å] are observed.

Keywords: crystal structure, naphthaldimine Schiff base, hydrogen bonding

Related literature  

For background to Schiff bases, see: Tolulope et al. (2013).graphic file with name e-71-0o941-scheme1.jpg

Experimental  

Crystal data  

  • C18H14N2O3

  • M r = 306.31

  • Monoclinic, Inline graphic

  • a = 12.8481 (7) Å

  • b = 15.4085 (6) Å

  • c = 7.6232 (3) Å

  • β = 98.040 (4)°

  • V = 1494.33 (12) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 293 K

  • 0.35 × 0.30 × 0.25 mm

Data collection  

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2004) T min = 0.957, T max = 0.989

  • 21149 measured reflections

  • 2622 independent reflections

  • 1646 reflections with I > 2σ(I)

  • R int = 0.046

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.055

  • wR(F 2) = 0.143

  • S = 1.14

  • 2622 reflections

  • 227 parameters

  • 42 restraints

  • H-atom parameters constrained

  • Δρmax = 0.16 e Å−3

  • Δρmin = −0.17 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: SHELXL2014.

Supplementary Material

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015020502/hb7529sup1.cif

e-71-0o941-sup1.cif (804.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015020502/hb7529Isup2.hkl

e-71-0o941-Isup2.hkl (209.9KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015020502/hb7529Isup3.cml

. DOI: 10.1107/S2056989015020502/hb7529fig1.tif

Plot of the title compound showing the intra­molecular C—H⋯N inter­action as a dashed line.

. DOI: 10.1107/S2056989015020502/hb7529fig2.tif

Crystal packing diagram showing the C—H⋯N and C—H⋯O inter­actions as dashed lines

CCDC reference: 1429914

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C16—H16⋯N2 0.93 2.31 2.961 (3) 127
C13—H13⋯O1′i 0.93 2.49 3.318 (14) 148
C18—H18A⋯O2ii 0.96 2.46 3.135 (18) 127

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank the management RSST, R&D Centre Bhara­thiar University and the Principal of SSMRV Degree College for support. RDB thanks The Oxford College of Science for access to research facilities. The authors also thank the SAIF, IIT, Chennai for providing the XRD facility.

supplementary crystallographic information

S1. Chemical context

Schiff bases are considered an important class of organic compounds, which have wide applications. In recent years, they have gained significant inter­est in the area of drug research and development owing to the broad bioactivities such as insecticidal, anti­bacterial, anti­tuberculosis and anti­microbial reported for the compounds and their metal complexes. These compounds play an important role in biological systems and are observed in various enzymes such as transaminases, tryptophan synthase etc. The important physical and biological properties of these compounds are related to the presence of the intra­molecular hydrogen bond and proton transfer equilibrium. Schiff bases have also been utilized as ligands to synthesize metal complexes with inter­esting applications. The steric and inductive effects introduced by substituents present on the aromatic portion of the Schiff base can influence the properties of the ligand significantly. In continuation of our efforts in understanding the role of subtle electronic variations such as substituent effects on Chemistry and activity of Schiff bases and their metal complexes, we herein report the crystal structure of Schiff base derived from 3-nitro­aniline and 2-meth­oxy naphthaldehyde (Tolulope et al., 2013).

S2. Structural commentary

The molecule of title compound is non-planar, with a dihedral angle between the naphthyl and phenyl aromatic rings of 59.99 (13)°, in which the two rings are twisted from one another. The C9—O3 single bond of 1.358 (3) Å and the C7═N2 double bond of 1.261 (3) Å .The bond angle of C5—N2—C7 of the imine group is 117.5 (2)°, less than 120°. The bond length of the nitro group is N1—O2(1.241 (6)Å) and N1—O1(1.239 (6)Å) and bond angle in O2—N1—O1 is 123.4 (12)° which is more than the planar bond angle of 120°. The torsion angles C8—C7—N2—C5 is 178.1 (2)°.These values support that the configurations about the N2=C7 bond is anti­(E-form), which is in accordance with the enol-imine tautomeric form.

S3. Supra­molecular features

The title compound has an intra molecular C16— H16···N2 hydrogen bond forming an S(6) motif (Table 2). Also there is a C—H···O inter­molecular inter­action, in which a C—H of the naphthyl ring of one molecule and O-atom of the nitro group of another molecule are linked to one another.

S4. Synthesis and crystallization

The block-like, yellow single crystals of the compound C18 H14 N2 O3, were grown using 1:1 mixture of CHCl3 and methanol as solvent by slow evaporation technique.

S5. Refinement

The hydrogen atoms in the structure were positioned geometrically (C—H = 0.93–0.98 Å. N—H = 0.86Å) and were refined using a riding model with Uiso(H) = xUeq(C,N), where x = 1.5 for methyl and 1.2 for all other atoms. The two oxygen atoms of the nitro group are disordered over two orientations. The SADI, SIMU, and ISOR commands in SHELXL (Sheldrick, 2015) were used to model the disorder.

Crystal data, data collection and structure refinement details are summarized in Table 1.

Figures

Fig. 1.

Fig. 1.

Plot of the title compound showing the intramolecular C—H···N interaction as a dashed line.

Fig. 2.

Fig. 2.

Crystal packing diagram showing the C—H···N and C—H···O interactions as dashed lines

Crystal data

C18H14N2O3 Dx = 1.362 Mg m3
Mr = 306.31 Melting point: 407 K
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
a = 12.8481 (7) Å Cell parameters from 5867 reflections
b = 15.4085 (6) Å θ = 2.6–29.9°
c = 7.6232 (3) Å µ = 0.09 mm1
β = 98.040 (4)° T = 293 K
V = 1494.33 (12) Å3 Block, yellow
Z = 4 0.35 × 0.30 × 0.25 mm
F(000) = 640

Data collection

Bruker Kappa APEXII CCD diffractometer 2622 independent reflections
Radiation source: fine-focus sealed tube 1646 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.046
ω and φ scan θmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2004) h = −15→15
Tmin = 0.957, Tmax = 0.989 k = −18→18
21149 measured reflections l = −9→8

Refinement

Refinement on F2 42 restraints
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055 H-atom parameters constrained
wR(F2) = 0.143 w = 1/[σ2(Fo2) + (0.0403P)2 + 0.9181P] where P = (Fo2 + 2Fc2)/3
S = 1.14 (Δ/σ)max < 0.001
2622 reflections Δρmax = 0.16 e Å3
227 parameters Δρmin = −0.17 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
C1 0.0584 (2) −0.09762 (18) 0.7746 (4) 0.0523 (7)
C2 −0.0226 (2) −0.03905 (19) 0.7675 (4) 0.0523 (7)
H2 −0.0893 −0.0562 0.7877 0.063*
C3 −0.0015 (2) 0.0457 (2) 0.7296 (4) 0.0566 (8)
H3 −0.0545 0.0870 0.7247 0.068*
C4 0.0976 (2) 0.07014 (18) 0.6986 (4) 0.0517 (7)
H4 0.1103 0.1276 0.6710 0.062*
C5 0.17862 (19) 0.01015 (18) 0.7081 (3) 0.0461 (7)
C6 0.1585 (2) −0.07494 (18) 0.7487 (4) 0.0498 (7)
H6 0.2118 −0.1162 0.7583 0.060*
C7 0.2942 (2) 0.07229 (17) 0.5418 (4) 0.0475 (7)
H7 0.2333 0.0823 0.4630 0.057*
C8 0.39198 (19) 0.10445 (16) 0.4875 (3) 0.0430 (6)
C9 0.3839 (2) 0.13912 (17) 0.3178 (4) 0.0485 (7)
C10 0.4724 (2) 0.17407 (18) 0.2520 (4) 0.0571 (8)
H10 0.4658 0.1972 0.1383 0.069*
C11 0.5665 (2) 0.17361 (19) 0.3552 (4) 0.0585 (8)
H11 0.6242 0.1970 0.3107 0.070*
C12 0.5808 (2) 0.13905 (17) 0.5278 (4) 0.0480 (7)
C13 0.6798 (2) 0.1397 (2) 0.6330 (4) 0.0622 (8)
H13 0.7372 0.1626 0.5870 0.075*
C14 0.6933 (2) 0.1077 (2) 0.7988 (5) 0.0649 (9)
H14 0.7595 0.1082 0.8662 0.078*
C15 0.6069 (2) 0.0736 (2) 0.8696 (4) 0.0622 (8)
H15 0.6161 0.0521 0.9847 0.075*
C16 0.5094 (2) 0.07154 (18) 0.7716 (4) 0.0537 (7)
H16 0.4532 0.0484 0.8211 0.064*
C17 0.49240 (19) 0.10383 (16) 0.5969 (3) 0.0424 (6)
C18 0.2726 (3) 0.1775 (2) 0.0501 (4) 0.0753 (10)
H18A 0.2006 0.1711 −0.0023 0.113*
H18B 0.2897 0.2381 0.0620 0.113*
H18C 0.3176 0.1502 −0.0242 0.113*
N1 0.0376 (2) −0.18893 (19) 0.8121 (5) 0.0849 (9)
N2 0.28245 (17) 0.03270 (16) 0.6825 (3) 0.0544 (6)
O3 0.28735 (15) 0.13796 (14) 0.2188 (3) 0.0669 (6)
O1 0.1053 (10) −0.2414 (9) 0.778 (4) 0.106 (5) 0.50 (4)
O2 −0.0433 (13) −0.2105 (10) 0.869 (4) 0.108 (5) 0.50 (4)
O1' 0.1105 (8) −0.2356 (11) 0.876 (4) 0.106 (5) 0.50 (4)
O2' −0.0556 (6) −0.2107 (9) 0.772 (3) 0.097 (4) 0.50 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0460 (16) 0.0463 (17) 0.0646 (19) −0.0062 (13) 0.0072 (14) 0.0025 (14)
C2 0.0372 (15) 0.061 (2) 0.0598 (18) −0.0039 (13) 0.0102 (13) −0.0005 (15)
C3 0.0424 (16) 0.059 (2) 0.069 (2) 0.0107 (14) 0.0099 (14) 0.0020 (15)
C4 0.0476 (16) 0.0463 (16) 0.0620 (18) −0.0013 (13) 0.0096 (13) 0.0044 (14)
C5 0.0354 (14) 0.0553 (18) 0.0477 (16) −0.0035 (13) 0.0059 (12) −0.0008 (13)
C6 0.0393 (15) 0.0476 (17) 0.0625 (18) 0.0038 (12) 0.0077 (13) 0.0042 (13)
C7 0.0418 (15) 0.0458 (16) 0.0548 (18) −0.0055 (12) 0.0063 (13) −0.0008 (13)
C8 0.0444 (16) 0.0331 (14) 0.0543 (17) −0.0011 (11) 0.0163 (13) −0.0015 (12)
C9 0.0487 (17) 0.0414 (16) 0.0577 (18) −0.0013 (12) 0.0149 (14) −0.0002 (13)
C10 0.062 (2) 0.0522 (18) 0.0618 (19) −0.0004 (14) 0.0238 (16) 0.0072 (14)
C11 0.0534 (19) 0.0560 (19) 0.072 (2) −0.0088 (14) 0.0310 (16) −0.0021 (15)
C12 0.0446 (16) 0.0420 (16) 0.0609 (18) −0.0049 (12) 0.0196 (14) −0.0074 (13)
C13 0.0451 (18) 0.072 (2) 0.073 (2) −0.0127 (15) 0.0206 (16) −0.0146 (17)
C14 0.0406 (17) 0.081 (2) 0.073 (2) −0.0059 (15) 0.0070 (15) −0.0106 (18)
C15 0.0538 (19) 0.073 (2) 0.0598 (19) −0.0040 (16) 0.0084 (15) 0.0028 (16)
C16 0.0436 (16) 0.0553 (18) 0.0644 (19) −0.0043 (13) 0.0146 (14) 0.0028 (15)
C17 0.0420 (15) 0.0313 (14) 0.0567 (17) −0.0024 (11) 0.0164 (13) −0.0051 (12)
C18 0.074 (2) 0.091 (3) 0.061 (2) −0.0056 (19) 0.0080 (17) 0.0119 (18)
N1 0.062 (2) 0.0590 (19) 0.136 (3) −0.0098 (16) 0.021 (2) 0.0112 (19)
N2 0.0412 (13) 0.0627 (16) 0.0610 (15) −0.0060 (11) 0.0132 (11) 0.0063 (13)
O3 0.0566 (13) 0.0810 (15) 0.0629 (13) −0.0057 (11) 0.0072 (10) 0.0200 (11)
O1 0.086 (5) 0.061 (4) 0.170 (12) 0.014 (3) 0.012 (6) 0.019 (6)
O2 0.094 (6) 0.071 (4) 0.172 (12) −0.023 (4) 0.066 (6) 0.021 (8)
O1' 0.083 (5) 0.069 (5) 0.165 (12) 0.003 (4) 0.008 (6) 0.056 (7)
O2' 0.074 (4) 0.067 (4) 0.153 (11) −0.025 (3) 0.029 (4) 0.002 (7)

Geometric parameters (Å, º)

C1—C2 1.372 (4) C11—H11 0.9300
C1—C6 1.374 (4) C11—C12 1.407 (4)
C1—N1 1.468 (4) C12—C13 1.406 (4)
C2—H2 0.9300 C12—C17 1.425 (3)
C2—C3 1.372 (4) C13—H13 0.9300
C3—H3 0.9300 C13—C14 1.345 (4)
C3—C4 1.380 (4) C14—H14 0.9300
C4—H4 0.9300 C14—C15 1.402 (4)
C4—C5 1.386 (4) C15—H15 0.9300
C5—C6 1.380 (4) C15—C16 1.366 (4)
C5—N2 1.418 (3) C16—H16 0.9300
C6—H6 0.9300 C16—C17 1.410 (4)
C7—H7 0.9300 C18—H18A 0.9600
C7—C8 1.463 (3) C18—H18B 0.9600
C7—N2 1.261 (3) C18—H18C 0.9600
C8—C9 1.390 (4) C18—O3 1.412 (3)
C8—C17 1.435 (4) N1—O1 1.241 (6)
C9—C10 1.412 (4) N1—O2 1.227 (6)
C9—O3 1.358 (3) N1—O1' 1.227 (6)
C10—H10 0.9300 N1—O2' 1.239 (6)
C10—C11 1.347 (4)
C2—C1—C6 123.1 (3) C11—C12—C17 118.9 (3)
C2—C1—N1 118.7 (3) C13—C12—C11 121.4 (3)
C6—C1—N1 118.2 (3) C13—C12—C17 119.7 (3)
C1—C2—H2 121.2 C12—C13—H13 119.3
C3—C2—C1 117.6 (3) C14—C13—C12 121.4 (3)
C3—C2—H2 121.2 C14—C13—H13 119.3
C2—C3—H3 119.7 C13—C14—H14 120.2
C2—C3—C4 120.7 (3) C13—C14—C15 119.6 (3)
C4—C3—H3 119.7 C15—C14—H14 120.2
C3—C4—H4 119.6 C14—C15—H15 119.6
C3—C4—C5 120.9 (3) C16—C15—C14 120.9 (3)
C5—C4—H4 119.6 C16—C15—H15 119.6
C4—C5—N2 122.9 (2) C15—C16—H16 119.4
C6—C5—C4 118.8 (2) C15—C16—C17 121.1 (3)
C6—C5—N2 118.2 (2) C17—C16—H16 119.4
C1—C6—C5 118.9 (2) C12—C17—C8 118.8 (2)
C1—C6—H6 120.6 C16—C17—C8 124.0 (2)
C5—C6—H6 120.6 C16—C17—C12 117.2 (2)
C8—C7—H7 116.1 H18A—C18—H18B 109.5
N2—C7—H7 116.1 H18A—C18—H18C 109.5
N2—C7—C8 127.9 (3) H18B—C18—H18C 109.5
C9—C8—C7 116.0 (2) O3—C18—H18A 109.5
C9—C8—C17 119.2 (2) O3—C18—H18B 109.5
C17—C8—C7 124.8 (2) O3—C18—H18C 109.5
C8—C9—C10 121.2 (3) O1—N1—C1 115.6 (9)
O3—C9—C8 117.1 (2) O2—N1—C1 121.0 (8)
O3—C9—C10 121.7 (3) O2—N1—O1 123.4 (12)
C9—C10—H10 120.3 O1'—N1—C1 119.3 (8)
C11—C10—C9 119.5 (3) O1'—N1—O2' 126.6 (12)
C11—C10—H10 120.3 O2'—N1—C1 114.1 (8)
C10—C11—H11 118.7 C7—N2—C5 117.5 (2)
C10—C11—C12 122.5 (3) C9—O3—C18 119.7 (2)
C12—C11—H11 118.7
C1—C2—C3—C4 0.5 (4) C9—C8—C17—C16 179.0 (2)
C2—C1—C6—C5 −2.1 (4) C9—C10—C11—C12 0.3 (4)
C2—C1—N1—O1 164.6 (15) C10—C9—O3—C18 −4.2 (4)
C2—C1—N1—O2 −13.9 (19) C10—C11—C12—C13 −179.8 (3)
C2—C1—N1—O1' −156.0 (17) C10—C11—C12—C17 −0.6 (4)
C2—C1—N1—O2' 24.5 (14) C11—C12—C13—C14 179.1 (3)
C2—C3—C4—C5 −1.1 (4) C11—C12—C17—C8 0.3 (4)
C3—C4—C5—C6 0.2 (4) C11—C12—C17—C16 −178.6 (2)
C3—C4—C5—N2 −178.1 (2) C12—C13—C14—C15 −0.5 (5)
C4—C5—C6—C1 1.3 (4) C13—C12—C17—C8 179.6 (2)
C4—C5—N2—C7 −53.8 (4) C13—C12—C17—C16 0.6 (4)
C6—C1—C2—C3 1.1 (4) C13—C14—C15—C16 0.7 (5)
C6—C1—N1—O1 −15.6 (15) C14—C15—C16—C17 −0.2 (5)
C6—C1—N1—O2 165.9 (18) C15—C16—C17—C8 −179.3 (3)
C6—C1—N1—O1' 23.9 (17) C15—C16—C17—C12 −0.4 (4)
C6—C1—N1—O2' −155.6 (13) C17—C8—C9—C10 −0.4 (4)
C6—C5—N2—C7 127.9 (3) C17—C8—C9—O3 179.7 (2)
C7—C8—C9—C10 178.5 (2) C17—C12—C13—C14 −0.1 (4)
C7—C8—C9—O3 −1.4 (3) N1—C1—C2—C3 −179.0 (3)
C7—C8—C17—C12 −178.7 (2) N1—C1—C6—C5 178.1 (3)
C7—C8—C17—C16 0.2 (4) N2—C5—C6—C1 179.7 (2)
C8—C7—N2—C5 178.1 (2) N2—C7—C8—C9 174.4 (3)
C8—C9—C10—C11 0.2 (4) N2—C7—C8—C17 −6.8 (4)
C8—C9—O3—C18 175.7 (3) O3—C9—C10—C11 −179.9 (3)
C9—C8—C17—C12 0.1 (4)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C16—H16···N2 0.93 2.31 2.961 (3) 127
C13—H13···O1′i 0.93 2.49 3.318 (14) 148
C18—H18A···O2ii 0.96 2.46 3.135 (18) 127

Symmetry codes: (i) −x+1, y+1/2, −z+3/2; (ii) −x, −y, −z+1.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: HB7529).

References

  1. Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435.
  2. Bruker (2004). APEX2, SAINT, XPREP and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341.
  4. Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
  5. Tolulope, M., Fasina, R. & Dada, O. (2013). J. Chem. Pharm. Res. 5, 177–181.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015020502/hb7529sup1.cif

e-71-0o941-sup1.cif (804.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015020502/hb7529Isup2.hkl

e-71-0o941-Isup2.hkl (209.9KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015020502/hb7529Isup3.cml

. DOI: 10.1107/S2056989015020502/hb7529fig1.tif

Plot of the title compound showing the intra­molecular C—H⋯N inter­action as a dashed line.

. DOI: 10.1107/S2056989015020502/hb7529fig2.tif

Crystal packing diagram showing the C—H⋯N and C—H⋯O inter­actions as dashed lines

CCDC reference: 1429914

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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