Table 2.
List of clinical and environmental biofilm samples subjected to cloning of PCR products.
Sample | C/Ea | Allele patternb | ST | Implication |
---|---|---|---|---|
191712 | C | 6,10,1/15,13,X,14,6 | 578c | Patient |
192147 | C | 6,10,1,13,2,X,6 | – | Patient |
163655 | C | 6,3,9,10,9,1,6 | B | Patient |
192091 | C | X,3,9,10,2,1,6 | 23c | Patient |
cal12_18 | E | +,+,+,+,+,+,+ | + | Hotel room with 2 cases (1 death) |
cal12_40 | E | 6,10,15,X,9,14,6 | 578c | Hotel room with 1 case (1 death) |
cal12_46 | E | 6,10,15,13,9,14,6 | 578 | Hotel room with 2 cases (1 death) |
cal12_97 | E | 6,10,+,+,9,14,+ | 578c | Hotel room with 1 case |
cal12_151 | E | 6,10,15,13,9,14,6 | 578 | Hotel room with 2 cases (2 deaths) |
F3 | E | 2/6,3,9,10,2,1,6 | 23 | Air filter |
Underlined bold regions were used (fliC, pilE, asd, mip, mompS, proA, neuA). Selected biofilm samples were taken from different rooms.
C, clinical; E, environmental.
X, PCR amplification failed; +, positive amplification but allele assignation failed.
Incomplete allele pattern but compatible with ST23 or ST578.