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. 2016 Jan 20;17:44. doi: 10.1186/s12859-016-0893-0

Table 13.

Horizontal and vertical comparison of gene pairs in real data

GCM dataset Horizontal comparison Vertical comparison
X 1141 > X 4940 X 1141 < X 4940 X 1141 > 33 & X 4940 > 232 X 1141 > 33 & X 4940 < 232 X 1141 < 33 & X 4940 > 232 X 1141 < 33 & X 4940 > 232
Class 11 2 9 3 1 1 6
Class 12 10 1 0 0 0 11
p-value 0.0027 0.0908
Lung1 dataset Horizontal comparison Vertical comparison
X 6678 > X 3330 X 6678 < X 3330 X 6678 > 7439 & X 3330 > 335 X 6678 > 7439 & X 3330 < 335 X 6678 < 7439 & X 3330 > 335 X 6678 < 7439 & X 3330 < 335
Class 1 41 3 18 11 10 5
Non-Class 1 19 1 0 2 1 17
p-value 0.7806 2.0716 × 10−7