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Allele frequency comparison for the three lineages. Correlation scatterplots for (A) DAF differences between bifarius‐E and each nearcticus lineage at each of 46,259 RNAseq SNPs and (B) global MAF differences between bifarius‐E and each nearcticus lineage at each of 37,848 ddRAD SNPs. Histograms of allele frequency differences for all three‐population pairs for (C) RNAseq SNP DAFs and (D) ddRAD SNP MAFs.
