Table 7.
Bacterial Identification at the Genus Level for the In-House Dataseta
| Escherichia coli sample number 1-4, 9-12, and 21-26 | |||||||
| Genus | IF | E[R] | E[ln (E u)] | E[WPC] | E[NIP] | E[NUP] | E[CI] |
| Escherichia | 14/14 | 1.4 | –365.2 ± 290.4 | 42.1 | 115 | 1 | 1 |
| Shigella | 14/14 | 1.6 | –349.6 ± 271.8 | 40.1 | 114 | 0 | 1 |
| Enterobacter | 2/14 | 5.0 | –36.8 ± 24.4 | 5.1 | 18 | 0 | 1 |
| Enterobacteriaceae | 1/14 | 3.0 | –13.9 ± 0.0 | 1.8 | 8 | 0 | 1 |
| Citrobacter | 1/14 | 4.0 | –13.2 ± 0.0 | 1.5 | 6 | 0 | 1 |
| Pseudomonas aeruginosa sample number 5-8, 13-16 and 27-28 | |||||||
| Genus | IF | E[R] | E[ln (E u)] | E[WPC] | E[NIP] | E[NUP] | E[CI] |
| Pseudomonas | 10/10 | 1.0 | –598.7 ± 647.8 | 71.3 | 102 | 34 | 1 |
| Acidovorax | 1/10 | 2.0 | –23.0 ± 0.0 | 2.0 | 4 | 2 | 3 |
| Azospira | 5/10 | 4.2 | –5.6 ± 8.3 | 1.2 | 2 | 0 | 3 |
| Thiobacillus | 1/10 | 2.0 | –5.6 ± 0.0 | 1.0 | 2 | 1 | 5 |
| Rothia | 1/10 | 3.0 | –4.8 ± 0.0 | 1.0 | 1 | 0 | 7 |
| Salmonella enterica sample number 17-20 | |||||||
| Genus | IF | E[R] | E[ln (E u)] | E[WPC] | E[NIP] | E[NUP] | E[CI] |
| Salmonella | 4/4 | 1.0 | –232.1 ± 21.1 | 27.1 | 61 | 7 | 1 |
| Haloferax | 2/4 | 2.5 | –7.2 ± 0.5 | 1.0 | 1 | 1 | 10 |
| Pseudovibrio | 1/4 | 2.0 | –5.5 ± 0.0 | 1.0 | 1 | 0 | 11 |
| Cupriavidus | 4/4 | 2.8 | –5.3 ± 2.5 | 1.1 | 2 | 1 | 6 |
| Aliivibrio | 3/4 | 4.0 | –1.7 ± 2.3 | 0.8 | 2 | 0 | 4 |
a The numerical entries in the table are the expected values E[X]. The E[ln (E u)] it is followed by its standard deviation ± σ X