Skip to main content
. 2016 Jan 22;82(3):939–953. doi: 10.1128/AEM.03741-15

TABLE 3.

Oligonucleotides used for TaqMan sqRT-PCR LGI1 gene expression experiments

08-5578 LGI1 target gene Sequence (5′–3′)
Length of PCR product (bp)
Forward primer TaqMan probe Reverse primer
bglAa AGCTGCTGCTGCAAACCAAT CGAAGGCGCTTACAACGTCGATGG AGTAACATCTTGAACGGAAAGTCCTT 73
rRNA genea CTTCCGCAATGGACGAAAGT TGACGGAGCAACGCCGCGT TTACGATCCGAAAACCTTCTTCA 66
lmo1901 TGATCCGCCGTATTACGAAAC AGGGTCACTACGCTGTGGTGTTCCGA AAGCCGTGCATGATCTTCCT 70
lmo1891 ACGGCAGGCAGTGGTTATG TGCCAACACAGGTGAGCAGGAAGA AAGGCAGTTCCTTTTCCTCAGA 67
lmo1889 GGCGGGAAAACCGAGAAG AACACTTTGACAGCCCAGAACACGCC TGCGGCGTACCACATTGA 70
lmo1885 CGGCGATGTGGTGGAATAC TGTCGGGCTTGGAGGTAACAGTT GAGCCAGCGGAGCATTTC 65
lmo1883 TTCACCTCACTATGCTCCACTACTG CTATGCGGTTGGTGACGGGAATGTAGA CATTCCACCACCGCCATT 72
lmo1882 CCGCTTTTGCAGCAGGAA AGGCGATGTTGCCGGAGCGATT GGGATGCAGTCGTCCATGTC 66
lmo1876 CACTTACCGCTGCGTTTGG CGCTCCGAGAATACCCGACTGCTACA TGTCGAAGAATTGCCTGCTCTT 69
lmo1873 ACAGCATTCGTATGAAAGCCATT TTTACGCTTTGTTTTTCGGCACGGAA TCGTCAGCGTTCATTTTGAGA 73
lmo1866 CACGTCATTAGTCTTCGCAGAGA ATGCTGCCCGCCTTGGATATGACA ATTAAATCCTGCCATTGCTTTCC 74
lmo1865 AGTTCCTATCCCTGCGGAAGA CATCCACAGCTTATGCTTCGGGATGAA TTGGGATACTTGCCCGCATA 70
lmo1864 ACCGGGAGATGCTGACAATT CTGATGAATACGGTGGCAAGCTGCC CTGCGAAAATCATCACACGATT 69
lmo1863 TCTCCCGCAGTACCGTGAA CGTGCCATTGCTGACCTTGAA CCTTGGAGAGATGGCCAGTCT 63
lmo1862 AAATGTCTGATGGACTTACAAAGCTATT CCAAGTGCAGGGATGTTCATAGCATTTATCCTA GCACTAACCGGTATTTTTTTTAATGC 109
lmo1861 GGAAATAGAAGCTTTCGCCAGTAT CGCAGGAACAACGTAGGGCTATATCCG GGAACTCCCGAGAAAAGAAAATG 79
lmo1859 AAGAGCGCGAAGCTGAAAGATA AAGGAAGTGCATTCATCAATTTGAGCTTTCC CCTCATCTTGGAATCGTTCCA 78
lmo1857 CACTGCCGCCAAGAAAAAAA CCAGCTTCTTGACAGTAATGGTTTTGACCGA GCAACTCTGTCCGAGCAATTT 77
a

Housekeeping gene not carried on LGI1. The relevant primers were described by Tasara and Stephan (38).