TABLE 1.
Isolate | Type | U.S. state or country | Outbreak associateda | Yr | Source | Pasteur ST | CCb | EC | Reference(s)c | GenBank accession no. |
---|---|---|---|---|---|---|---|---|---|---|
F2365 | 4b | California | Yes, Mexican-style cheese | 1985 | Cheese | 1 | 1 | I | 31, 32 | NC_002973.6 |
SLCC 2378 | 4e | NAe | No | NA | Poultry | 73 | 1 | I | 33 | FR733644 |
LL195 | 4b | Switzerland | Yes, Vacherin Mont d'Or cheese | 1983 | Human | 1 | 1 | I | 34 | HF558398.1 |
Lm_1824 | 4b | Italy | Nod | 2012 | Cheese processing facility | 2 | 2 | IV | 25 | AZIV00000000 |
ATCC 19117 | 4d | NA | No | NA | Sheep | 2 | 2 | IV | 33 | FR733643 |
HPB2262 | 4b | Italy | Yes, corn (gastroenteritis) | 1997 | Human | 2 | 2 | IV | 35, 36 | AATL00000000 |
ScottA | 4b | Massachusetts | Yes, milk | 1983 | Human | 290 | 2 | IV | 37, 38 | CM001159.1 |
F4233 | 1/2b | Pennsylvania | Yes, unknown | 1987 | Human | 3 | 3 | VIII | 39 | JMUA00000000 |
FSL N1-017 | 1/2b | NA | No | 1998 | Food | 3 | 3 | VIII | 36 | AARP00000000 |
G6054 | 1/2b | Illinois | Yes, chocolate milk (gastroenteritis) | 1994 | Human | 3 | 3 | VIII | 40 | JPTW00000000 |
SLCC 2482 | 7 | NA | No | 1966 | Human | 3 | 3 | VIII | 33 | FR720325 |
SLCC 2755 | 1/2b | NA | No | 1967 | Chinchilla | 66 | 3 | VIII | 33 | FR733646 |
07PF0776 | 4b | USA | No | NA | Human | 4 | 4 | 41, 42 | NC_017728.1 | |
Clip80459 | 4b | NA | No | 1999 | Human | 4 | 4 | NC_012488.1 | ||
L312 | 4b | NA | Unknown | NA | Cheese | 4 | 4 | 30 | FR733642 | |
FSL J2-064 | 1/2b | USA | No | 1989 | Human | 5 | 5 | VI | AARO00000000.2 | |
L1181 | 1/2b | USA | No | 2009 | Human | 5 | 5 | VI | JNGR00000000 | |
L1254 | 1/2b | USA | No | 2009 | Human | 5 | 5 | VI | JNFI00000000 | |
L2624 | 1/2b | Multistate, USA | Yes, cantaloupe | 2011 | Human | 5 | 5 | VI | 4 | CP007686 |
L2663 | 1/2b | Multistate, USA | Yes, cantaloupe | 2011 | Human | 5 | 5 | VI | 4 | JNHA00000000 |
Lm_1886 | 1/2b | Italy | Nod | 2012 | Cheese processing facility | 5 | 5 | VI | 25 | AZIX00000000 |
H7858 | 4b | Multistate, USA | Yes, frankfurter | 1998 | Frankfurter | 6 | 6 | II | 32 | AADR00000000 |
G4599 | 1/2b | Italy | Yes, unknown (gastroenteritis) | 1993 | Human | 59 | 59 | 43 | JPTX00000000 | |
FSL J1-175 | 1/2b | USA | No | NA | Water | 87 | 36 | AARK00000000 | ||
FSL J1-194 | 1/2b | USA | No | 1997 | Human | 88 | 36 | AARJ00000000 | ||
SLCC 2540 | 3b | USA | No | 1956 | Human | 617 | 33 | FR733645 | ||
10403S | 1/2a | USA | No | 1987 | Reference strain | 85 | 7 | VII | 36 | AARZ00000000 |
J2692 | 1/2a | USA | No | 2003 | Human | 7 | 7 | VII | JNGJ00000000 | |
L1846 | 1/2a | Louisiana | Yes, hog head cheese | 2010 | Human | 7 | 7 | VII | 44 | CP007688 |
L2626 | 1/2a | Multistate, USA | Yes, cantaloupe | 2011 | Human | 561 | 7 | VII | 4 | CP007684 |
L2676 | 1/2a | Multistate, USA | Yes, cantaloupe | 2011 | Human | 7 | 7 | VII | 4 | CP007685 |
SLCC 5850 | 1/2a | United Kingdom | No | 1924 | Rabbit | 12 | 7 | VII | 33 | FR733647 |
EGD | 1/2a | NA | No | NA | Reference strain | 12 | 7 | VII | 45 | NC_022568.1 |
08_5578 | 1/2a | Canada | Yes, deli meat | 2008 | Human | 292 | 8 | V | 26 | NC_013766.1 |
08_5923 | 1/2a | Canada | Yes, deli meat | 2008 | Human | 120 | 8 | V | 26 | NC_013768.1 |
Lm_1823 | 1/2a | Italy | Nod | 2012 | Cheese processing facility | 8 | 8 | V | 25 | AZIU00000000 |
Lm_1889 | 1/2a | Italy | Nod | 2012 | Cheese processing facility | 8 | 8 | V | 25 | AZIY00000000 |
EGDe | 1/2a | NA | No | NA | Reference strain | 35 | 9 | 46 | NC_003210.1 | |
FSL R2-561 | 1/2c | USA | No | NA | Human | 9 | 9 | 36 | AARS00000000 | |
LO28 | 1/2c | NA | No | 1985 | Reference strain | 210 | 9 | 36 | AARY00000000 | |
SLCC 2372 | 1/2c | United Kingdom | No | 1935 | Human | 122 | 9 | 33 | FR733648 | |
SLCC 2479 | 3c | NA | No | 1966 | NA | 9 | 9 | 33 | FR733649 | |
F4235 | 1/2a | Pennsylvania | Yes, unknown | 1987 | Human | 11 | 11 | III | 39 | JNGK00000000 |
F6854 | 1/2a | Oklahoma | No | 1988 | Human | 11 | 11 | III | 32 | AADQ00000000 |
F6900 | 1/2a | USA | No | 1988 | Human | 86 | 11 | III | 27 | AARU00000000.2 |
J0161 | 1/2a | Multistate, USA | Yes, turkey deli meat | 2000 | Human | 11 | 11 | III | 27, 47 | AARW00000000 |
J0221 | 1/2a | USA | No | 2000 | Human | 11 | 11 | III | JNGL00000000 | |
J0847 | 1/2a | USA | No | 2001 | Human | 11 | 11 | III | JNGM00000000 | |
J2818 | 1/2a | Multistate, USA | Yes, turkey deli meat | 2000 | Turkey deli meat | 86 | 11 | III | 27, 47 | AARX00000000 |
L1023 | 1/2a | Multistate, USA | Yes, Mexican-style cheese | 2009 | Human | 11 | 11 | III | 48 | JNGN00000000 |
2012-L5240 | 1/2a | Multistate, USA | Yes, ricotta salata | 2012 | Human | 101 | 101 | 12 | JNGO00000000 | |
2012L-5323 | 1/2a | Multistate, USA | Yes, ricotta salata | 2012 | Human | 101 | 101 | 12 | JNGY00000000 | |
Lm_1840 | 1/2a | Italy | Nod | 2012 | Cheese processing facility | 101 | 101 | 25 | AZIW00000000 | |
Finland1988 | 3a | Finland | Yes, butter | 1988 | Unknown | 155 | 36 | AART00000000 | ||
FSL J2-003 | 1/2a | USA | No | 1993 | Human | 89 | AARM00000000 | |||
FSL N3-165 | 1/2a | USA | No | NA | Soil | 90 | AARQ00000000 | |||
L1118 | 1/2a | Multistate, USA | Yes, sprouts | 2009 | Human | 573 | 2 | JNGQ00000000 | ||
L2074 | 1/2a | Texas | Yes, celery | 2010 | Human | 378 | 49 | CP007689 | ||
L2625 | 1/2a | Multistate, USA | Yes, cantaloupe | 2011 | Human | 29 | 4 | CP007687 | ||
SLCC 7179 | 3a | Austria | No | 1986 | Cheese | 91 | 33 | FR733650 | ||
N53-1 | 1/2a | Denmark | No | 2002 | Salmon | 121 | 121 | 50 | HE999705.1 | |
La111 | 1/2a | Denmark | No | 1996 | Salmon processing facility | 121 | 121 | 50 | HE999704.1 | |
Lm_1880 | 1/2a | Italy | Nod | 2012 | Cheese processing facility | 121 | 121 | 25 | AZIZ00000000 | |
FSL J2-071 | 4c | USA | No | 1994 | Animal | 131 | 71 | 36 | AARN00000000 | |
SLCC 2376 | 4c | NA | No | NA | Poultry | 71 | 71 | 33 | FR733651 | |
HCC23 | 4a | USA | No | NA | Catfish | 201 | 51 | NC_011660.1 | ||
L99 | 4a | Netherlands | No | 1950 | Cheese | 201 | 52 | FM211688 | ||
M7 | 4a | China | No | NA | Milk | 201 | 53 | CP002816.1 | ||
FSL J1-208 | 4a | Georgia | No | 1998 | Animal | 569 | 54 | AARL00000000 |
Outbreaks designated according to food source, if known. All outbreaks were invasive listeriosis unless otherwise noted.
Clonal complex numbers assigned based on Pasteur MLST ST as well as data presented by Ragon et al. (5).
References are those describing the genome sequence of a given isolate as well as any publication describing the outbreak with which a given isolate was associated.
Isolates from ricotta salata processing facility; not classified as outbreak related because no matching human cases were identified.
NA, not available.