Table 2. Bayesian estimates of evolutionary parameters based on L, M, and S genomic fragments of SFTSV.
L segment | M segment | S segment | |
---|---|---|---|
Sequence number | 126 | 129 | 166 |
Sampling time interval | 2007–2014 | 2007–2014 | 2007–2014 |
Coefficient of variation | 0.26 | 0.36 | 0.80 |
Evolutionary rate | |||
(10*-4 nucleotide substitutions/site/year) | 1.87 (0.84–3.02) | 2.84 (1.53–4.64) | 5.07 (2.98–7.09) |
tMRCA of SFTSV | 1868.5[1745.1–1940] | 1867.6[1735.7–1933.2] | 1930[1880.3–1963.5] |
tMRCA of SFTSV genotype A | 1933.5[1865.6–1971.8] | 1960.3[1917.5–1984.4] | 1962.2[1934.9–1991.5] |
tMRCA of SFTSV genotype B | 1901.4[1807.7–1957.5] | 1924[1848.5–1965.6] | 1971.4[1924.6–1982.9] |
tMRCA of SFTSV genotype D | 1928.4[1857–1966.8] | 1951.5[1895.2–1978.7] | 1982.1[1959.4–1995.5] |
tMRCA of SFTSV genotype E | 2005.4[1999.6–2008.6] | 2004.3[1996.4–2008.1] | 1987.7[1966.6–2002.7] |
tMRCA of SFTSV genotype F | 1944.5[1888–1978.2] | 1971.3[1935–1991.7] | 1978.5[1961–1997.3] |
Zhoushan lineage of genotype A | 1997[1981.4–2005.8] | 1997[1979.3–2006.2] | 2007.3[1999–2011.1] |
Zhoushan lineage of genotype B | 2004.1[1996.1–2008.6] | 1996.8[1979.9–2005.9] | 2008.2[2004.5–2010.4] |
Japan lineage of genotype B | 1974[1938.8–1993.3] | 1990.3[1946–1998.2] | 1998.45[1986.9–2005.6] |
The 95% highest posterior density credible regions are given in parentheses.