. 2016 Jan 25;11(1):e0147849. doi: 10.1371/journal.pone.0147849

Table 3. Fold change at each time point of candidate hormone-related genes in S. miltiorrhiza under SA induction in RNA-seq.

			Log₂FC
Unigene ID	Predicted function	Gene ID (swissprot/nr)	at 2 hpi	at 8 hpi	Hormone role
c37047.graph_c0	AOS (Arabidopsis thaliana)	sp\|Q96242\|CP74A_ARATH	-1.20	-0.06	JA synthesis
c28646.graph_c1	AOS (Vitis vinifera)	gi\|225428606\|ref\|XP_002281226.1\|	-0.69	-1.27	JA synthesis
c14695.graph_c0	AOC (Salvia miltiorrhiza)	gi\|377552569\|gb\|AFB69864.1\|	-1.08	-1.02	JA synthesis
c26418.graph_c0	LOX5 (Arabidopsis thaliana)	sp\|Q9LUW0\|LOX5_ARATH	-1.63	-0.20	JA synthesis
c35963.graph_c0	LOX5 (Arabidopsis thaliana)	sp\|Q9LUW0\|LOX5_ARATH	-1.89	-1.15	JA synthesis
c32834.graph_c0	LOX1.5 (Solanum tuberosum)	sp\|Q43191\|LOX15_SOLTU	-0.05	-1.43	JA synthesis
c27417.graph_c0	MYC2 (Theobroma cacao)	gi\|508703788\|gb\|EOX95684.1\|	-1.69	-0.15	JA signaling
c36831.graph_c0	ERF1B (Arabidopsis thaliana)	sp\|Q8LDC8\|ERF92_ARATH	3.05	0.55	ET signaling
c30725.graph_c0	EIN4 (Arabidopsis thaliana)	sp\|Q9ZTP3\|EIN4_ARATH	-1.02	-0.53	ET signaling
c29674.graph_c0	ETR2 (Arabidopsis thaliana)	sp\|Q0WPQ2\|ETR2_ARATH	-1.90	-0.48	ET signaling
c30435.graph_c0	NCED (Arabidopsis thaliana)	sp\|Q9LRR7\|NCED3_ARATH	2.57	0.62	ABA synthesis
c36534.graph_c0	ADH (Camellia sinensis)	gi\|308943732\|gb\|ADO51748.1\|	1.88	1.66	ABA synthesis
c36552.graph_c0	ADH (Ricinus communis)	gi\|255568816\|ref\|XP_002525379.1\|	1.61	1.48	ABA synthesis
c27930.graph_c0	PYL4 (Arabidopsis thaliana)	sp\|O80920\|PYL4_ARATH	2.10	0.15	ABA signaling
c34845.graph_c0	PP2C protein HAB1 (Arabidopsis thaliana)	sp\|Q9CAJ0\|P2C16_ARATH	-3.78	-0.60	ABA signaling
c21120.graph_c0	PP2CA (Arabidopsis thaliana)	sp\|P49598\|P2C37_ARATH	-3.78	0.02	ABA signaling
c18562.graph_c0	ARR9 (Arabidopsis thaliana)	sp\|O80366\|ARR9_ARATH	0.30	1.15	CK signaling
c28213.graph_c0	ARR9 (Arabidopsis thaliana)	sp\|O80366\|ARR9_ARATH	2.18	1.23	CK signaling
c35025.graph_c0	AHP6 (Arabidopsis thaliana)	sp\|Q9SSC9\|AHP6_ARATH	1.07	0.28	CK signaling
c24922.graph_c0	LAX2 (Medicago truncatula)	sp\|Q9FEL7\|LAX2_MEDTR	-1.02	-3.12	Auxin signaling
c28766.graph_c1	LAX2 (Medicago truncatula)	sp\|Q9FEL7\|LAX2_MEDTR	-1.83	-0.40	Auxin signaling
c21632.graph_c0	LAX5 (Medicago truncatula)	sp\|Q8L883\|LAX5_MEDTR	-0.72	-2.67	Auxin signaling
c27396.graph_c0	GID2 (Arabidopsis thaliana)	sp\|Q9STX3\|GID2_ARATH	1.40	0.41	GA signaling
c36872.graph_c0	DELLA protein GAI1 (Vitis vinifera)	sp\|Q8S4W7\|GAI1_VITVI	-1.48	-0.52	GA signaling