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. 2016 Jan 26;7:1. doi: 10.3389/fphar.2016.00001

Table 3.

Further examination of three pass-filter discordant genotype calls.

Variant ID, alleles Quality metrics (reference reads, alternate reads, genotype quality) WES MiSeq® amplicon sequencing Sanger sequencing
rs17885098, T/C 18, 0, 54 Homozygous reference Heterozygous variant Homozygous reference
rs3758581, G/A 7, 0, 18 Homozygous reference Heterozygous variant Homozygous reference
rs1135840, G/C 29, 19, 99 Heterozygous variant Homozygous variant Homozygous variant