Table 2.
Results from the pathway analysis in stationary and logarithmic phases
| Metabolic pathway | Metabolite | Total | Hits | Raw p | FDR |
|---|---|---|---|---|---|
| Valine, leucine, and isoleucine biosynthesis | Citraconic acid, isopropylmalic acid, L-leucine | 27 | 3 | 0.000068 | 0.005 |
| Pyruvate metabolism | Acetic acid, isopropanol | 32 | 2 | 0.004560 | 0.171 |
| Glutathione metabolism | Ascorbic acid, ornithine | 38 | 2 | 0.006400 | 0.171 |
| Fatty acid biosynthesis | Caprylic acid , capric acid | 49 | 2 | 0.010500 | 0.210 |
| Sulfur metabolism | Acetic acid | 18 | 1 | 0.058400 | 0.709 |
Total, the total number of compounds in the pathway; Hits, the actually matched number from the user uploaded data; Raw p, the original P value calculated from the enrichment analysis; FDR (false discovery rate), the P value adjusted using FDR