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. 2016 Jan 7;6(2):379–396. doi: 10.1002/ece3.1865

Table 2.

Summary of one mtDNA and four nDNA loci and their amplification conditions used for phylogenetic analysis of 86 tortoises in the genus Gopherus

Locus # of haplotypes Length (bp) # variable sites MgCl2 (mmol/L) Annealing temp °C Citation
mtDNA (ND3/ND4) 18 1109 190 4 52 Edwards 2003; Edwards et al. (2014)
BDNF 6 640 5 2 57 Leaché and McGuire (2006)
R35 13 500 17 4 53.4 Spinks et al. (2004)a
TB02 16 425 13 1 59 Thomson et al. (2008)
TB07 13 590 10 1.5 58 Thomson et al. (2008)
a

Original primers from Fujita et al. (2004).