Table 2.
Species | ERV-A | ERV-B | PDI-C | PDI-C active site motifs | Phytozome 10 dataset | |
---|---|---|---|---|---|---|
Chlorophytes | Chlamydomonas reinhardtii | 1 | 1 | 1 | CHWC | C. reinhardtii (v5.5) |
Volvox carteri | 1 | 1 | 1 | CHWC | V. carteri (v2.0) | |
Coccomyxa subellipsoidea C-169 | 1 | 1 | 1 | CPWC | C. subellipsoidea C-169 (v2.0) | |
Charophytes | Klebsormidium flaccidum | 1 | 1 | 1 | CPWS | (Not available) |
Bryophytes | Physcomitrella patens | 4 | 1 | 1 | CPWS | P. patens (v3.0) |
Lycophytes | Selaginella moellendorffii | 1 | 1 | 1 | CIWS | S. moellendorffii (v1.0) |
Monocots | Brachypodium distachyon | 3 | 1 | 1 | CYWS | B. distachyon (v2.1) |
Oryza sativa | 3 | 1 | 1 | CYWS | O. sativa (v7.0) | |
Zea mays | 3 | 1 | 1 | CYWS | Z. mays (6a) | |
Sorghum bicolor | 3 | 1 | 1 | CYWS | S. bicolor (v2.1) | |
Dicots | Solanum lycopersicum | 2 | 2 | 1 | CYWS | S. lycopersicum (iTAG2.3) |
Solanum tuberosum | 2 | 2 | 1 | CYWS | S. tuberosum (v3.4) | |
Vitis vinifera | 2 | 1 | 1 | CYWS | V. vinifera (Genoscope.12X) | |
Theobroma cacao | 2 | 1 | 1 | CYWS | T. cacao (v1.1) | |
Eutrema salsugineum | 3 | 1 | 3 | CYWS (×2); CYWC | E. salsugineum (v1.0) | |
Capsella rubella | 2 | 1 | 3 | CYWS (×2); CYWC | C. rubella (v1.0) | |
Brassica rapa Chiifu-401 | 4 | 2 | 6 | CYWS (×4); CYWC (×2) | (Not available) | |
Arabidopsis thaliana | 2 | 1 | 3 | CYWS (×2); CYWC | A. thaliana TAIR10 | |
Prunus persica | 2 | 1 | 1 | CYWS | P. persica (v1.0) | |
Cucumis sativus | 3 | 1 | 1 | CYWS | C. sativis (v1.0) | |
Glycine max | 4 | 2 | 4 | CYWS (×2); CSWC (×2) | G. max (v1) | |
Phaseolus vulgaris | 2 | 1 | 2 | CYWS, CSWC | P. vulgaris (v1.0) | |
Medicago truncatula | 2 | 1 | 2 | CYWS, CSWC | M. truncatula (Mt4.0v1) | |
Populus tricocarpa | 4 | 2 | 2 | CYWS (×2) | P. trichocarpa (v3.0) |
The plant species that was the source of the Erv41p/Erv46p-like proteins in this study is denoted in bold