Table 2.
Taxonomic classes (RefSeq) that are overrepresented in microbialites relative to the surrounding environment by ANOVA using STAMP.
| Bacteria | p-value (corr) | Effect size | Fil: Avg Rfreq (%) | Filr: SD (%) | MB: Avg Rfreq. (%) | MB: SD (%) | Sed: Avg Rfreq. (%) | Sed: SD (%) |
|---|---|---|---|---|---|---|---|---|
| Acidobacteriia | 1.96E-03 | 0.889 | 0.314 | 0.164 | 0.839 | 0.139 | 0 | 0 |
| Acidobacteria (Unclassified) | 8.34E-05 | 0.972 | 0.096 | 0.053 | 0.849 | 0.094 | 0 | 0 |
| Alphaproteobacteria | 4.52E-04 | 0.947 | 7.708 | 0.266 | 19.768 | 2.196 | 2.679 | 2.008 |
| Chloroflexi (class) | 9.30E-05 | 0.973 | 0.449 | 0.142 | 1.481 | 0.116 | 0 | 0 |
| Deferribacteres (class) | 1.13E-03 | 0.917 | 0.059 | 0.014 | 0.117 | 0.02 | 0 | 0 |
| Deinococci | 1.82E-03 | 0.892 | 0.335 | 0.131 | 0.613 | 0.081 | 0 | 0 |
| Deltaproteobacteria | 1.81E-04 | 0.961 | 2.151 | 0.933 | 7.85 | 0.448 | 0.398 | 0.563 |
| Gemmatimonadetes | 1.39E-03 | 0.904 | 0.208 | 0.16 | 0.797 | 0.114 | 0 | 0 |
| Gloeobacteria | 7.68E-05 | 0.972 | 0.056 | 0.038 | 0.36 | 0.03 | 0 | 0 |
| Ktedonobacteria | 1.49E-03 | 0.9 | 0.076 | 0.042 | 0.31 | 0.062 | 0 | 0 |
| Solibacteres | 1.16E-04 | 0.973 | 0.386 | 0.279 | 3.346 | 0.331 | 0 | 0 |
| Thermomicrobia (class) | 1.44E-03 | 0.905 | 0.058 | 0.03 | 0.481 | 0.111 | 0 | 0 |
| Thermotogae (class) | 5.03E-03 | 0.845 | 0.044 | 0.023 | 0.138 | 0.006 | 0.023 | 0.033 |
STAMP ANOVA tested significant differences between multiple groups (microbialite, sediments, and filters) using a post-hoc test (Tukey–Kramer at 0.95), an effect size (Eta-squared), a p-value (<0.01) and a multiple-test correction of Benjamini–Hochberg FDR. Results are for RefSeq classifications that significantly differed (p < 0.01) for microbialite over the surrounding environments (sediments and filters). Avg Rfreq, Average relative frequency; SD, Standard deviation; p-val corr, p-value ANOVA corrected; Unclass, Unclassified; MB, Microbialite; Sed, Sediment.
Avg Rfreq, Average relative frequency; SD, Standard deviation. P-val corr, p-value ANOVA corrected (By Benjamini–Hochberg FDR); Fil, Filter represents surrounding water; MB, Microbialite; Sed, Sediment.