Table 2. Summary of total the number of genes significantly up- or down-regulated (Up-/Down- all), and those responsive to specific VOCs in E. coli’s transcriptome (Up-/Down- specific).
| Sample | Up-all | Down-all | Sum-all | Up-specific | Down-specific | Sum-specific | % Up-all | % Down-all | % Sum-all | % Up-specific | %Down specific | % Sum specific |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| B | 430 | 249 | 679 | 25 | 12 | 37 | 10.39 | 6.01 | 16.40 | 3.68 | 1.77 | 5.45 |
| CHP | 324 | 388 | 712 | 33 | 37 | 70 | 7.83 | 9.37 | 17.20 | 4.63 | 5.20 | 9.83 |
| CP | 403 | 494 | 897 | 87 | 64 | 151 | 9.73 | 11.93 | 21.67 | 9.70 | 7.13 | 16.83 |
| DMA | 261 | 123 | 384 | 4 | 1 | 5 | 6.30 | 2.97 | 9.28 | 1.04 | 0.26 | 1.30 |
| DMS | 274 | 120 | 394 | 7 | 3 | 10 | 6.62 | 2.90 | 9.52 | 1.78 | 0.76 | 2.54 |
| NMP | 445 | 406 | 851 | 71 | 21 | 92 | 10.75 | 9.81 | 20.56 | 8.34 | 2.47 | 10.81 |
| NMS | 506 | 568 | 1074 | 113 | 147 | 260 | 12.22 | 13.72 | 25.94 | 10.52 | 13.69 | 24.21 |
| T | 418 | 223 | 641 | 39 | 17 | 56 | 10.10 | 5.39 | 15.48 | 6.08 | 2.65 | 8.74 |
Sum: Sum of Up- and Down- regulated genes per treatment. “%-all” indicates the percentage of DE genes out of the 4140 locus tag analyzed, “%-specific” indicates the percentage of DE genes specific to the VOC out of the sum of DE genes of the particular VOC treatment [e.g. % Up-specific = “Up-specific”/“Sum-all” x 100].