Table 1.
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Classification | Domain Bacteria | TAS [24] | |
Phylum Proteobacteria | TAS [25] | ||
Class Gammaproteobacteria | TAS [26, 27] | ||
Order ‘Enterobacteriales’ | TAS [26, 27] | ||
Family Enterobacteriaceae | TAS [28] | ||
Genus Escherichia | TAS [29, 30] | ||
Species Escherichia coli | TAS [29, 30] | ||
Gram stain | Negative | TAS [31] | |
Cell shape | Rod | TAS [31] | |
Motility | Motile | TAS [31] | |
Sporulation | None-sporeforming | TAS [31] | |
Temperature range | Mesophile | TAS [31] | |
Optimum temperature | 37 °C | TAS [31] | |
pH range; Optimum | 5.5–8.0; 7.0 | TAS [31] | |
MIGS-6 | Habitat | Host-associated | TAS [1, 32] |
MIGS-6.3 | Salinity range | Not reported | |
MIGS-22 | Oxygen requirement | Aerobe and facultative anaerobe | TAS [31, 33] |
Carbon source | Carbohdrates, salicin, sorbitol, mannitol, indole, peptides | TAS [34] | |
Energy metabolism | Chemo-organotrophic | TAS [33] | |
MIGS-15 | Biotic relationship | Parasitism | TAS [1, 32] |
MIGS-14 | Pathogenicity | Pathogenic | TAS [1, 32] |
MIGS-4 | Geographic location | China | NAS |
MIGS-5 | Sample collection | 2010 | NAS |
MIGS-4.1 | Latitude | Not reported | |
MIGS-4.2 | Longitude | Not reported | |
MIGS-4.3 | Depth | Not reported | |
MIGS-4.4 | Altitude | Not reported |
aEvidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence); IDA: Inferred from Direct Assay. These evidence codes are from the Gene Ontology project [35]