TABLE 1.
Secondary structure assignment of the recombinant proAC construct
The values have been obtained through the deconvolution (CDNN software) of circular dichroism data acquired in the 190–260-nm range. Prediction values are from the indicated secondary structure prediction servers and our SKI-1/S1P prodomain homology-based model.
| Deconvolution values (CDNN) | psipred server | PredictProtein server | Model | |
|---|---|---|---|---|
| Interval | 190–260 nm | |||
| Helix | 10% | 12% | 12% | 11% |
| Beta sheets | 37% | 20% | 23% | 15% |
| Beta turn | 18% | |||
| Other | 35% | 68% | 65% | 74% |