Table 1.
Alignment statistics results of the Lab-DS strain and the Lab-DR strain
| Sample | Lab-DS | Lab-DR | ||
|---|---|---|---|---|
| Total Reads | 55124418 | 55124418 | ||
| Total Base Pairs | 4961197620 | 4961197620 | ||
| Map to Genome | Reads number | Percentage | Reads number | Percentage |
| Total mapped reads | 34524233 | 62.63% | 34332448 | 62.28% |
| perfect match | 14519833 | 26.34% | 14083456 | 25.55% |
| <= 5 bp mismatch | 20004400 | 36.29% | 20248992 | 36.73% |
| unique match | 31987234 | 58.03% | 31827840 | 57.74% |
| multi-position match | 2536996 | 4.60% | 2504607 | 4.54% |
| Total Unmapped Reads | 20600185 | 37.37% | 20791970 | 37.72% |
| Map to Gene | Reads number | Percentage | Reads number | Percentage |
| Total mapped reads | 24264446 | 44.02% | 24636261 | 44.69% |
| perfect match | 9944281 | 18.04% | 9877334 | 17.92% |
| <= 5 bp mismatch | 14320165 | 25.98% | 14758927 | 26.77% |
| unique match | 23129820 | 41.96% | 23464323 | 42.57% |
| multi-position match | 1134626 | 2.06% | 1171938 | 2.13% |
| Total Unmapped Reads | 30859972 | 55.98% | 30488157 | 55.31% |