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. 2015 Aug 26;8(1-2):9–23. doi: 10.3727/215517915X689038

Table 1.

Primer Sets Used for PCR Analysis

Target mRNAor DNA Primer Name: Sequence (5′–3′) Size (bp) Reference
Endogenous OCT3/4 mRNA OCT3/4-S (forward): ATT TCA CCA GGC CCC CGG CT
OCT3/4-AS (reverse): GCT GAT CTG CTG CAG TGT GGG T
822 16
Endogenous SOX2 mRNA SOX2-S (forward): AGG ACC AGC TGG GCT ACC CG
SOX2-AS (reverse): GGC GCC GGG GAG ATA CAT GC
320 29
Endogenous KLF4 mRNA KLF4-S (forward): CGT GCT GAA GGC GTC GCT GA
KLF4-AS (reverse): GGG TGC ACG AAG AGA CCG CC
173 10
Endogenous NANOG mRNA N-S (forward): CCT CCA GCA GAT GCA AGA ACT C
N-AS (reverse): GTA AAG GCT GGG GTA GGT AGG TG
172 46
Endogenous ALP mRNA ALP-S (forward): TGG CCC CCA TGC TGA GTG ACA C
ALP-AS (reverse): TGG CGC AGG GGC ACA GCA GAC
160 27
Endogenous GAPDH mRNA GAPDH-S (forward): GGC GAT GCT GGC GCT GAG TA
GAPDH-AS (reverse): ACA GTT TCC CGG AGG GGC CA
325 14
Exogenous OCT3/4 mRNA βA-1 (forward): TCT GAC TGA CCG CGT TAC TCC CAC A
OCT3/4-AS (reverse): GCT GAT CTG CTG CAG TGT GGG T
836 13,16
Exogenous SOX2 mRNA βA-1 (forward): TCT GAC TGA CCG CGT TAC TCC CAC A
SOX2-AS (reverse): GGC GCC GGG GAG ATA CAT GC
945 13,16
Transgene OCT3/4 DNA β-gl-1S (forward): TGT GCT GTC TCA TCA TTT TGG CAA A
OCT3/4-AS (reverse): GCT GAT CTG CTG CAG TGT GGG T
787 16,45
Transgene SOX2 DNA β-gl-1S (forward): TGT GCT GTC TCA TCA TTT TGG CAA A
SOX2-AS (reverse): GGC GCC GGG GAG ATA CAT GC
880 29,45

Exogenous octamer-binding transcription factor 3/4 (OCT3/4) and sex-determining region Y box 2 (SOX2) mRNA are derived from the transgenes pCXLE-hOCT3/4-shp53 and pCXLE-hSK, respectively. Similarly, exogenous OCT3/4 and SOX2 DNA correspond to the integrated pCXLE-hOCT3/4-shp53 and pCXLE-hSK in human deciduous tooth dental pulp cell-derived induced pluripotent stem cells (HDDPC-iPSCs), respectively. KLF4, Kruppel-like factor 4; ALP, alkaline phosphatase, tissue-nonspecific isozyme; GAPDH, glyceraldehyde 3-phosphate dehydrogenase.