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. 2016 Jan 16;22:40–60.

Table 9. Splicing events correlated to downregulated genes.

Genes P-value Gene description GENE DOWN Pval Log Fold change
FGD3
0.0044
FYVE, RhoGEF and PH domain containing 3 (FGD3), transcript variant X2, misc_RNA
4.16E-13
−2.02
CDH5
0.0141
cadherin 5, type 2 (vascular endothelium; CDH5), mRNA
0.00000179
−1.49
CASP1
0.0096
caspase 1, apoptosis-related cysteine peptidase (CASP1), RefSeqGene on chromosome 11
0.003233781
−0.85
C3
0.0033
complement component 3 (C3), mRNA
0.004117402
−0.57
RDH10
0.0204
retinol dehydrogenase 10 (all-trans; RDH10), mRNA
0.009398676
−0.70
NEO1
0.041
neogenin 1 (NEO1), RefSeqGene on chromosome 15
0.00995951
−0.55
CDH11
0.0139
cadherin 11, type 2, OB-cadherin (osteoblast; CDH11), RefSeqGene on chromosome 16
0.01161935
−0.52
PCTP
0.0151
phosphatidylcholine transfer protein (PCTP), transcript variant X4, misc_RNA
0.014216733
−1.20
SP110
0.0143
SP110 nuclear body protein (SP110), RefSeqGene (LRG_109) on chromosome 2
0.015998943
−0.50
NIPSNAP1
0.0173
nipsnap homolog 1 (C. elegans; NIPSNAP1), transcript variant X1, mRNA
0.016613623
−0.47
BCAS1
0.0022
breast carcinoma amplified sequence 1 (BCAS1), transcript variant X9, mRNA
0.025350687
−4.06
GABRP
0.0273
gamma-aminobutyric acid (GABA) A receptor, pi (GABRP), transcript variant 2, mRNA
0.031249095
−2.79
SYCE1L
0.0262
synaptonemal complex central element protein 1-like (SYCE1L), mRNA
0.032750969
−0.98
PROM1
0.0258
prominin 1 (PROM1), RefSeqGene on chromosome 4
0.038456406
−0.54
BRAF
0.029
B-Raf proto-oncogene, serine/threonine kinase (BRAF), RefSeqGene (LRG_299) on chromosome 7
0.042463081
−0.53
SIAE
0.0287
sialic acid acetylesterase (SIAE), RefSeqGene on chromosome 11
0.047026974
−0.54
VIPR1
0.0068
vasoactive intestinal peptide receptor 1 (VIPR1), RefSeqGene on chromosome 3
0.047041988
−0.49
BAZ2B 0.0057 bromodomain adjacent to zinc finger domain, 2B (BAZ2B), transcript variant 3, non-coding RNA 0.047636931 −0.73