Table 7. Publicly available gene expression data sets comparing sterile SIRS/trauma patients to later or non–time-matched sepsis/infection patients.
| Data set | Year | Submitting author |
Paper reference number |
Control used here |
Condition used here |
Sample type used |
Platform |
n control |
n case |
Time points present in data set |
|---|---|---|---|---|---|---|---|---|---|---|
| GSE5772 | 2007 | Tang | 29 | ICU nonsepsis (43% trauma) |
Sepsis— early + late |
Neutrophils | GPL4274 | 23 | 70 | Mixed: admission or sepsis onset |
| GSE9960 | 2009 | Tang | 8 | ICU nonsepsis | Sepsis | Monocytes | GPL570 | 16 | 54 | Mixed: admission or sepsis onset |
| E-MEXP-3621 | 2012 | Harokopos | 40 | Trauma at admission |
Trauma at onset of sepsis |
Monocytes | A-Affy-37 (GPL571) |
5 | 5 | Admission versus onset of sepsis |
| E-MTAB-1548 | 2014 | Almansa | 21 | Postsurgery (average 2 days) |
Sepsis after surgery (average 4 days) |
Whole blood | A-MEXP-2183 (GPL10332) |
34 postsurgery |
39 | Postsurgery (average 2 days), onset of sepsis (average 4 days) |