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. 2016 Jan 5;4:e1511. doi: 10.7717/peerj.1511

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©2016 Angly et al.

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

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RDA plot showing the relationship between GBR environmental parameters and Hellinger-transformed microbial profiles: (A) for all environmental factors, and (B) with the contribution of salinity removed. Disks represent sampling sites and are colored according to the AIMS water quality index (dark green: very good, green: good, yellow: moderate, orange: poor, red: very poor). OTUs are depicted by red crosses and the genus-level Greengenes taxonomy of the most discriminating ones is shown. The factors explaining sample distribution are represented by blue arrows: rainfall in the last 7 days (rain˙7d), water temperature (water˙temp), water quality index (water˙qual˙idx) and salinity. Any significant association is indicated by a star (PERMANOVA; p < 0.05).