Table 2.
Detailed information regarding breakpoints for each patient
| Sample | Left_chr | Left_str | Left breakpoint | Gene_left | Right_chr | Right_str | Right breakpoint | Gene_right | Translocation mode |
|---|---|---|---|---|---|---|---|---|---|
| SCMC‐000206 | chr12 | F | 12,023,837 | ETV6 | chr21 | R | 36,315,905 | RUNX1 | c |
| chr5 | F | 5,923,540 | KIAA0947 (dist = 433,096) | chr12 | F | 12,023,848 | ETV6 | ||
| FLJ33360 (dist = 387,013) | |||||||||
| chr21 | R | 36,315,676 | RUNX1 | chr5 | F | 5,684,751 | KIAA0947 (dist = 194,403) | ||
| FLJ33360 (dist = 625,705) | |||||||||
| SCMC‐000452 | chr12 | F | 12,032,593 | ETV6 | chr21 | R | 36,275,614 | RUNX1 | c |
| chr12 | R | 12,032,602 | ETV6 | chr21 | F | 36,275,819 | RUNX1 | d | |
| SCMC‐000479 | chr12 | R | 12,033,450 | ETV6 | chr21 | F | 36,266,210 | RUNX1 | d |
| chr12 | R | 12,029,669 | ETV6 | chr21 | R | 36,266,328 | RUNX1 | b | |
| SCMC‐000862 | chr12 | F | 12,027,788 | ETV6 | chr21 | R | 36,326,005 | RUNX1 | c |
| chr12 | R | 12,026,106 | ETV6 | chr21 | F | 36,325,404 | RUNX1 | d | |
| SCMC‐000863 | chr12 | F | 12,023,597 | ETV6 | chr21 | R | 36,275,255 | RUNX1 | c |
| chr5 | R | 36,122,247 | LMBRD2 | chr21 | F | 36,275,263 | RUNX1 | ||
| chr5 | F | 36,122,307 | LMBRD2 | chr12 | F | 12,023,436 | ETV6 | ||
| SCMC‐000864 | chr12 | F | 12,035,255 | ETV6 | chr21 | R | 36,416,976 | RUNX1 | c |
| SCMC‐000867 | chr12 | F | 12,035,516 | ETV6 | chr21 | R | 36,281,679 | RUNX1 | c |
| SCMC‐000926 | chr12 | F | 12,023,822 | ETV6 | chr21 | R | 362,65,359 | RUNX1 | c |
| chr12 | R | 12,023,685 | ETV6 | chr21 | F | 37,500,446 | LOC100133286 (dist = 1503) | d | |
| CBR3‐AS1 (dist = 3548) | |||||||||
| SCMC‐000966 | chr12 | F | 12,031,429 | ETV6 | chr21 | R | 36,411,881 | RUNX1 | c |
| chr6 | F | 79,662,190 | PHIP | chr21 | F | 36,414,387 | RUNX1 | ||
| chr6 | R | 132,835,666 | STX7 (dist = 1322) | chr12 | F | 12,031,621 | ETV6 | ||
| TAAR9 (dist = 23,663) | |||||||||
| SCMC‐001031 | chr12 | F | 12,036,660 | ETV6 | chr21 | R | 36,262,972 | RUNX1 | c |
| chr12 | R | 12,036,598 | ETV6 | chr21 | F | 36,263,015 | RUNX1 | d | |
| SCMC‐001108 | chr12 | F | 120,28,006 | ETV6 | chr21 | R | 36,402,216 | RUNX1 | c |
| chr12 | R | 12,028,066 | ETV6 | chr21 | F | 36,402,001 | RUNX1 | d | |
| SCMC‐001213 | chr12 | F | 120,34,768 | ETV6 | chr21 | R | 36,289,889 | RUNX1 | c |
| chr12 | R | 8,174,744 | SLC2A3 (dist = 85,795) | chr21 | F | 36,289,801 | RUNX1 | d | |
| FOXJ2 (dist = 10,558) | |||||||||
| SCMC‐001222 | chr12 | F | 120,35,760 | ETV6 | chr21 | R | 36,309,078 | RUNX1 | c |
| chr12 | R | 12,046,241 | ETV6 | chr21 | F | 36,309,775 | RUNX1 | d | |
| SCMC‐001224 | chr12 | F | 12,029,780 | ETV6 | chr21 | R | 36,363,476 | RUNX1 | c |
| chr12 | R | 12,029,781 | ETV6 | chr21 | F | 36,363,464 | RUNX1 | d | |
| SCMC‐001245 | chr12 | F | 12,036,973 | ETV6 | chr21 | R | 36,283,393 | RUNX1 | c |
| chr8 | F | 26,466,011 | DPYSL2 | chr12 | F | 12,037,354 | ETV6 | ||
| chr8 | R | 29,723,210 | LOC286135 (dist = 55,819) | chr21 | F | 36,283,600 | RUNX1 | ||
| SCMC‐001384 | chr12 | R | 12,036,313 | ETV6 | chr21 | F | 36,292,336 | RUNX1 | d |
| SCMC‐001388 | chr12 | F | 12,032,965 | ETV6 | chr21 | R | 36,308,543 | RUNX1 | c |
| chr12 | R | 12,033,033 | ETV6 | chr21 | F | 36,308,464 | RUNX1 | d | |
| SCMC‐001434 | chr12 | F | 12,031,547 | ETV6 | chr21 | R | 36,358,156 | RUNX1 | c |
| SCMC‐001437 | chr12 | R | 12,035,361 | ETV6 | chr21 | F | 36,264,128 | RUNX1 | d |
| SCMC‐001443 | chr12 | F | 12,029,090 | ETV6 | chr21 | R | 36,327,209 | RUNX1 | c |
| chr12 | R | 12,029,101 | ETV6 | chr21 | F | 36,328,064 | RUNX1 | d | |
| SCMC‐001478 | chr12 | F | 12,029,274 | ETV6 | chr21 | R | 36,357,909 | RUNX1 | c |
| chr12 | R | 12,029,278 | ETV6 | chr21 | F | 36,357,982 | RUNX1 | d | |
| SCMC‐001511 | chr12 | F | 12,029,759 | ETV6 | chr21 | R | 36,400,256 | RUNX1 | c |
| chr12 | R | 12,029,760 | ETV6 | chr21 | F | 36,400,256 | RUNX1 | d | |
| SCMC‐001579 | chr12 | F | 12,029,886 | ETV6 | chr21 | R | 38,264,151 | RUNX1 | c |
| chr15 | F | 86,092,449 | AKAP13 | chr21 | F | 36,264,161 | RUNX1 | ||
| chr15 | R | 86,092,248 | AKAP13 | chr12 | F | 12,029,986 | ETV6 | ||
| SCMC‐001580 | chr12 | F | 12,027,748 | ETV6 | chr21 | R | 36,261,050 | RUNX1 | c |
| SCMC‐001644 | chr12 | F | 12,031,966 | ETV6 | chr21 | R | 36,259,665 | RUNX1 | c |
| chr12 | R | 12,031,976 | ETV6 | chr21 | F | 36,259,758 | RUNX1 | d | |
| SCMC‐001645 | chr12 | F | 12,023,103 | ETV6 | chr21 | R | 36,264,307 | RUNX1 | c |