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. 2016 Feb 1;8:6. doi: 10.1186/s13321-016-0117-7

Table 3.

Statistical results for the QSAR models based on 150 descriptors and Pubchem fingerprints for the test set

R 2adj q 2 qext2 RMSEtrain MAEtrain RMSEtest MAEtest AD coverage (%)
kNN 0.885 0.878 0.585 0.303 0.217 0.718 0.415 41.0
RF 0.932 0.905 0.639 0.239 0.171 0.709 0.547 82.7
SVM 0.953 0.948 0.606 0.199 0.086 0.710 0.527 67.0
RVM 0.942 0.941 0.640 0.212 0.165 0.684 0.516 64.4
laGP 0.789 0.768 0.605 0.418 0.315 0.720 0.551 73.6
MPLE 0.654 0.633 0.572 0.527 0.382 0.754 0.580 83.4
XGBoost 0.920 0.907 0.622 0.271 0.205 0.707 0.538 74.7
Consensus 0.922 NA 0.669 0.284 0.215 0.676 0.515 75.7
Consensus (Except MPLE) 0.934 NA 0.669 0.258 0.197 0.671 0.509 72.9