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. 2016 Feb 1;8:6. doi: 10.1186/s13321-016-0117-7

Table 9.

Nine PubchemFP fragment alerts and representative structures

No. Fingerprint Fragment Description Bit substructure R 2adj change Cramer’s V Representative structure
Positive fragment alerts
1 PubchemFP400 graphic file with name 13321_2016_117_Figaf_HTML.gif Detailed atom neighborhoods N(~ H)(:C)(:C) 0.00086 0.15810 graphic file with name 13321_2016_117_Figag_HTML.gif
2 PubchemFP359 graphic file with name 13321_2016_117_Figah_HTML.gif Simple atom nearest neighbors C(~ C)(:N)(:N) 0.00162 0.15641 graphic file with name 13321_2016_117_Figai_HTML.gif
4 PubchemFP770 graphic file with name 13321_2016_117_Figaj_HTML.gif Complex SMARTS patterns Nc1c(N)cccc1 0.00167 0.14722 graphic file with name 13321_2016_117_Figak_HTML.gif
5 PubchemFP833 graphic file with name 13321_2016_117_Figal_HTML.gif Complex SMARTS patterns NC1C(N)CCCC1 0.00100 0.14504 graphic file with name 13321_2016_117_Figam_HTML.gif
6 PubchemFP527 graphic file with name 13321_2016_117_Figan_HTML.gif Simple SMARTS patterns C:C:N-[#1] 0.00036 0.13989 graphic file with name 13321_2016_117_Figao_HTML.gif
Negative fragment alerts
1 PubchemFP15 Counts of N ≥ 2 Hierarchic element counts ≥2 N 0.00174 0.16108 graphic file with name 13321_2016_117_Figap_HTML.gif
2 PubchemFP442 graphic file with name 13321_2016_117_Figaq_HTML.gif Detailed atom neighborhoods C(–C)(=N) 0.00024 0.15474 graphic file with name 13321_2016_117_Figar_HTML.gif
3 PubchemFP418 graphic file with name 13321_2016_117_Figas_HTML.gif Simple SMARTS patterns C=N 0.00094 0.13903 graphic file with name 13321_2016_117_Figat_HTML.gif
PubchemFP14 Counts of N ≥ 1 Hierarchic element counts ≥1 N 0.00002 0.13650 graphic file with name 13321_2016_117_Figau_HTML.gif