Table 6. Association regions, SLAF markers, and number of genes related to the sour trait.
| Scaffold ID | Start | End | Size (bp) | SLAF marker | Gene number |
|---|---|---|---|---|---|
| CM3,5_scaffold00003 | 2,631,000 | 2,653,000 | 22,000 | SLAF4675 | 0 |
| SLAF4679 | |||||
| CM3,5_scaffold00003 | 3,188,000 | 3,256,000 | 68,000 | SLAF4736 | 4 |
| SLAF4745 | |||||
| CM3,5_scaffold00004 | 7,621,000 | 7,864,000 | 243,000 | SLAF6659 | 15 |
| SLAF6693 | |||||
| CM3,5_scaffold00009 | 7,143,000 | 7,243,000 | 100,000 | SLAF12456 | 2 |
| SLAF12467 | |||||
| CM3,5_scaffold00011 | 4,255,000 | 4,504,000 | 249,000 | SLAF14408 | 33 |
| SLAF14409 | |||||
| SLAF14440 | |||||
| CM3,5_scaffold00018 | 3,724,000 | 3,750,000 | 26,000 | SLAF20908 | 2 |
| SLAF20910 | |||||
| CM3,5_scaffold00018 | 4,157,000 | 4,183,000 | 26,000 | SLAF20972 | 1 |
| SLAF20979 | |||||
| CM3,5_scaffold00018 | 5,769,000 | 5,845,000 | 76,000 | SLAF21206 | 8 |
| SLAF21215 | |||||
| CM3,5_scaffold00018 | 5,874,000 | 5,947,000 | 73,000 | SLAF21222 | 4 |
| SLAF21231 | |||||
| CM3,5_scaffold00024 | 2,947,000 | 2,955,000 | 8,000 | SLAF25822 | 1 |
| SLAF25825 | |||||
| CM3,5_scaffold00032 | 4,022,000 | 4,025,000 | 3,000 | SLAF31553 | 0 |
| SLAF31554 | |||||
| CM3,5_scaffold00040 | 2,861,000 | 2,988,000 | 127,000 | SLAF36320 | 6 |
| SLAF36334 | |||||
| CM3,5_scaffold00054 | 362,000 | 438,000 | 76,000 | SLAF42241 | 2 |
| SLAF42254 | |||||
| CM3,5_scaffold00054 | 833,000 | 987,000 | 154,000 | SLAF42301 | 7 |
| SLAF42321 | |||||
| CM3,5_scaffold00054 | 1,441,000 | 1,480,000 | 39,000 | SLAF42384 | 0 |
| SLAF42394 | |||||
| CM3,5_scaffold00054 | 1,920,000 | 2,240,000 | 320,000 | SLAF42476 | 29 |
| SLAF42498 | |||||
| SLAF42509 | |||||
| CM3,5_scaffold00054 | 2,287,000 | 2,313,000 | 26,000 | SLAF42523 | 0 |
| SLAF42526 | |||||
| CM3,5_scaffold00055 | 2,323,000 | 2,397,000 | 74,000 | SLAF42926 | 5 |
| SLAF42936 | |||||
| CM3,5_scaffold00083 | 196,000 | 261,000 | 65,000 | SLAF50072 | 7 |
| SLAF50085 | |||||
| CM3,5_scaffold00088 | 141,000 | 253,000 | 112,000 | SLAF50944 | 5 |
| SLAF50974 | |||||
| CM3,5_scaffold00089 | 595,000 | 867,000 | 272,000 | SLAF51212 | 42 |
| SLAF51247 | |||||
| CM3,5_scaffold00095 | 491,000 | 496,000 | 5,000 | SLAF52032 | 0 |
| SLAF52035 | |||||
| CM3,5_scaffold00114 | 53,000 | 120,000 | 67,000 | SLAF53315 | 12 |
| SLAF53325 |
Scaffold ID: scaffold number; Start: the starting position of the candidate region; End: the end position of the candidate region; Size: the size of the region, in units of bp; SLAF marker: the differential SLAF markers in the region; Gene number: the number of genes in the region. The data were obtained using the Geno_ratio.pl software.