Table 3. Distribution of SNPs, type and zygosity of variants per chromosome in the two grape strains.
| Chra | SNPsb | Trsc | Trvd | Hete | Homf | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Genotype | SBC | SBBM | SBC | SBBM | SBC | SBBM | SBC | SBBM | SBC | SBBM |
| Chr1 | 198773 | 207314 | 68.6% | 68.64% | 31.35% | 31.36% | 76.71% | 77.84% | 23.29% | 22.16% |
| Chr2 | 125954 | 130699 | 69.5% | 69.57% | 30.42% | 30.43% | 77.2% | 77.88% | 22.8% | 22.12% |
| Chr3 | 169113 | 174349 | 70.4% | 70.19% | 29.53% | 29.81% | 68.33% | 69.43% | 31.69% | 30.57% |
| Chr4 | 165317 | 172309 | 69.9% | 69.79% | 30.04% | 30.21% | 74.92% | 75.97% | 25.08% | 24.03% |
| Chr5 | 225200 | 231442 | 69.7% | 69.69% | 30.21% | 30.31% | 74.65% | 75.59% | 26.35% | 24.41% |
| Chr6 | 184826 | 193126 | 68.9% | 68.87% | 31.04% | 31.13% | 71.56% | 72.48% | 28.44% | 27.52% |
| Chr7 | 161183 | 168199 | 69.1% | 69.05% | 30.82% | 30.95% | 72.03% | 73.12% | 27.97% | 26.88% |
| Chr8 | 196361 | 202887 | 68.7% | 68.73% | 31.25% | 31.27% | 64.95% | 65.71% | 35.05% | 34.29% |
| Chr9 | 196258 | 203205 | 69.8% | 69.76% | 30.16% | 30.24% | 70.58% | 71.86% | 29.42% | 28.14% |
| Chr10 | 149493 | 154405 | 69.8% | 69.75% | 30.11% | 30.25% | 66.6% | 67.68% | 33.4% | 32.14% |
| Chr11 | 146092 | 152081 | 70.4% | 70.14% | 29.58% | 29.86% | 75.55% | 76.4% | 24.45% | 23.6% |
| Chr12 | 185733 | 190987 | 69.4% | 69.35% | 30.57% | 30.65% | 65.96% | 67.16% | 34.04% | 32.84% |
| Chr13 | 214826 | 222976 | 69.2% | 69.09% | 30.73% | 30.91% | 71.5% | 73.03% | 28.5% | 26.97% |
| Chr14 | 201949 | 208926 | 69.5% | 69.49% | 30.45% | 30.51% | 73.3% | 74.25% | 26.7% | 25.74% |
| Chr15 | 140970 | 146118 | 70.8% | 70.69% | 29.16% | 29.31% | 78.53% | 79.51% | 21.47% | 20.49% |
| Chr16 | 186206 | 192863 | 70.0% | 69.98% | 29.91% | 30.02% | 71.43% | 72.56% | 28.57% | 27.44% |
| Chr17 | 101565 | 104890 | 71.6% | 71.25% | 28.4% | 28.75% | 64.37% | 64.98% | 35.63% | 35.02% |
| Chr18 | 214459 | 222506 | 68.9% | 68.79% | 31.07% | 31.21% | 63.88% | 64.58% | 36.12% | 35.42% |
| Chr19 | 182516 | 191064 | 69.2% | 69.17% | 30.75% | 30.83% | 85.96% | 86.92% | 14.06% | 13.08% |
| Total | 3346794 | 3347036 | 69.6% | 69.58% | 30.29% | 30.42% | 72.00% | 73.00% | 28.00% | 27.00% |
aChromosome.
bThe total number of SNPs.
cPercentage conversion into the same basetype.
dPercentage conversion into different types of bases.
eHeterozygous (two or more bases exist) percentage.
fHomozygous (only one base exists) percentage.