Table 4. Structure refinement.
State III | State IV | |
---|---|---|
Resolution range (Å) | 30.27–3.00 | 41.11–2.60 |
Completeness (%) | 95.68 | 76.92 |
σ Cutoff | 0 | 0 |
No. of reflections, working set | 7719 | 8779 |
No. of reflections, test set | 860 | 972 |
Final R cryst | 0.231 | 0.219 |
Final R free | 0.286 | 0.282 |
No. of non-H atoms | ||
Protein | 2852 | 2813 |
Ion | 1 | 3 |
Water | — | 46 |
Total | 2853 | 2862 |
R.m.s. deviations | ||
Bonds (Å) | 0.003 | 0.004 |
Angles (°) | 0.856 | 0.933 |
Average B factors (Å2) | ||
Protein | 77.5 | 50.1 |
Ion | 100.1 | 63.39 |
Water | — | 36.2 |
Total | 77.5 | 49.99 |
Ramachandran plot | ||
Favoured regions (%) | 88.16 | 93.33 |
Additionally allowed (%) | 8.95 | 4.80 |
Outliers (%) | 2.89† | 1.87† |
Most of the residues with main-chain conformation outliers are prolines or glycines; others either form hydrogen bonds to other atoms that affect the main-chain conformation or are located in turns and adjacent to prolines or glycines.