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. 2015 Aug 17;6(31):30993–31006. doi: 10.18632/oncotarget.5206

Table 1. The primer sequences used in the each CDX2 promoter fragment.

pGL3-CDX2-promoter Primer pairs Length of product
−2167/+417 F: 5′-TCTATCGATA GGTACC AGAGCCACGTCTTCAGG-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
2584 bp
−1681/+417 F: 5′-TCTATCGATA GGTACC GGTCTCCCACCTCTTG-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
2098 bp
−1393/+417 F: 5′-TCTATCGATA GGTACC GATGAAGGCGATGGTGAC-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
1810 bp
−1250/+417 F: 5′-TCTATCGATA GGTACC TCGCCGCAGTGATCCT-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
1667 bp
−950/+417 F: 5′-TCTATCGATA GGTACCAGTTGCCTTATCATCTCCT-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
1367 bp
−675/+417 F: 5′-TCTATCGATA GGTACC TAACCACTAGCCTAACTTCT-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
1092 bp
−427/+417 F: 5′-TCTATCGATA GGTACC ACAGGGCGGGAAGGAAT-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
844 bp
−272/+417 F: 5′-TCTATCGATA GGTACC CAACCACTGCTCCTGTCT-3′
R: 5′-CTTAGATCGC AGATCT GCACGGAGCTAGGGTAC-3′
689 bp

The underlined parts in the primers are KpnI and BglII adaptors.