Table 2. Specific ubiquitinated proteins known to be degraded by macroautophagy.

Protein	Protein types	Autophagy receptor	E3 ligase	Ub chains	Ref
AGO2	Native	NDP52	Unkown	Unkown	[71]
ARTD10	Aggregates	p62	Unkown	Unkown	[72]
DICER1	Native	NDP52	Unkown	Unkown	[71]
Dvl2	Aggregates	p62	VHL	K63	[73]
HIF2A	Aggregates	p62	VHL	Unkown	[74]
HTT	Aggregates	TOLLIP	Rsp5	K48 and K63	[64]
NFKBIA	Aggregates	p62	Unkown	Unkown	[75]
p53	Aggregates	p62	MDM2	K63	[70]
p65	Aggresomes	p62	Unkown	Unkown	[76]
RHOA	Native	p62	Unkown	Unkown	[77]
TFRC	Native	OPTN	Unkown	Unkown	[78]