Table 2.
Prediction parameter | Epitope peptide sequence |
---|---|
Flexibility | IPFSTQDE, PIVTDKE, LSWFKKGSS, VQYEGDG, PIVTEKD, LNWFKKGSS, FVLKKEV, IPFSTEDGQ, PVVTKKE, INWYKKGSS, EIRDVNK, LHWFRKGSS |
Accessibility | SFKLEKEVAETQ, QVKYEGTDAP, PFSTQDEKGVTQN, IVTDKEKPVNIEAEPP, KLSWFKKGSSEA, KFKVVKEIAETQ, RVQYEGDGS, MDLEKRHV, VTEKDSPVNIEAEPP, KLNWFKKGSSEA, KEAAAKEAAAKEAAAKKGMSYA, LKKEVSETQHGT, KVEYKGEDAP, TEDGQGKAHNGR, NPVVTKKEEPVNIEAEPP |
Antigenic propensity | QHGTVLVQVKYE, PCKIPFS, GESYIVVG, FKVVKEI, GTIVIRVQYE, SPCKIPFEI, LEKRHVLGRLITVNPIV, SYIIIGVEP, CTNTFVLKKEVS, GTILIKVEYK, PCKIPFS, GTTVVKVKYE, PCKVPIEI, VNKEKVVGRIIS, SYIVIGVGD |
Exposed surface | SFKLEKE, VTDKEKPVNI, KFKVVKE, KLNWFKK, LKKEVSET, KVEYKGE, VVTKKEEPVN, KINWYKKGSSE, KEAAAKK, RDVNKEKV |
Hydrophilicity | EKEVAETQHGT, KYEGTDAPCK, VTDKEKPVN, FSTQDEKGVTQNG, KKGSSEAA, AETQHGT, QYEGDGSPCK, VTEKDSPVN, KKEVSETQHGT, VEYKGEDAPCK, FSTEDGQGKAHNGR, KKEEPVN, YKKGSSEAAAKEAAAKEAAAKE, DKEMAETQHGTT, RDVNKEK, AENTNSVTN, RKGSSHH, KINWYKKGSSEA, KFSIDKEMAETQHGTT, KVKYEGA, EIRDVNKEKVVGR, PFAENTNSVTN, FRKGSSHH |
Polarity | SFKLEKEVAETQH, IVTDKEKPVNIE, KLSWFKKGSSE, KFKVVKEIAETQH, EIMDLEKRHVLGRL, KLNWFKKGSSE, KEAAAKEAAAKEAAAKK, LKKEVSETQH, KVEYKGEDA, GKAHNGRL, PVVTKKEEPVNIE, KINWYKKGSSE, KFSIDKEMAETQH, KVPIEIRDVNKEKVVGR, TLHWFRKGSSHHHHHH |
a)A linear epitope, AENTNSVT, was also predicted in a turn.