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. 2016 Feb 5;7:85. doi: 10.3389/fmicb.2016.00085

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Copyright © 2016 Hu, Lv, Gu, Chen, Xiao and Liu.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic analysis of different genomic regions of the 25 new isolates and 122 reference strains. (A) Full-length E2 gene sequences. (B) Partial E2 gene sequences. 23 newly isolated strains (indicated by ) accompanied with seven references strains (indicated by ) were clustered into subgenotype 2.1d. The other two newly isolated strains (labeled by ) belonged to subgenotype 2.1b.

Inline graphic — Phylogenetic analysis of different genomic regions of the 25 new isolates and 122 reference strains. (A) Full-length E2 gene sequences. (B) Partial E2 gene sequences. 23 newly isolated strains (indicated by ) accompanied with seven references strains (indicated by ) were clustered into subgenotype 2.1d. The other two newly isolated strains (labeled by ) belonged to subgenotype 2.1b.