Skip to main content
. 2016 Feb 5;11(2):e0148325. doi: 10.1371/journal.pone.0148325

Table 4. Number of reads, OTUs, expected OTUs at 500 reads and rate of new OTUs at 500 reads obtained from 16S rRNA pyrosequencing of rye sourdoughs from four Estonian bakeries (Abakery, Bbakery, Cbakery and Dbakery).

Samples are coded according to the description reported in Table 1.

Sample Raw reads Reads OTUs Expected OTUs at 500 reads Rate of new OTUs at 500 reads
A0 1929 1574 15 8.745 0.008
A1 NA* NA NA NA NA
A2 4332 4153 10 4.941 0.003
A3 2740 2335 12 6.750 0.004
A4 2320 1952 22 10.561 0.011
Bs 2417 2281 7 4.643 0.001
B0 1259 303 21 NA NA
B1 2462 1260 12 7.414 0.007
B2 859 503 18 17.940 0.020
B3 932 688 14 11.589 0.014
B4 2179 1334 17 9.875 0.010
C0 2754 2749 7 2.389 0.003
C1 1410 263 15 NA NA
C2 1960 1922 9 4.349 0.004
C3 3569 3437 12 4.149 0.004
D1 1415 1314 13 7.186 0.009
D2 2435 2356 7 3.661 0.002
D3 991 593 11 9.878 0.012
D4 3122 2923 10 4.197 0.002
D5 3303 2966 6 2.815 0.002

* NA–not acquired