Table 2. Data quality evaluation of sample.
Sample name | Raw reads | Clean reads | GC (%) | Error (%) | Q20 (%) | Total mapped |
---|---|---|---|---|---|---|
DW4 | 14828646 | 14638472 | 46.28 | 0.04 | 96.54 | 13339188(91.12%) |
FW4_1 | 11124834 | 10985291 | 46.31 | 0.04 | 96.64 | 9970094 (90.76%) |
FW4_2 | 13629475 | 13435056 | 46.55 | 0.04 | 96.55 | 12162626(90.53%) |
DW12 | 14950551 | 14780536 | 45.72 | 0.04 | 96.87 | 13469925(91.13%) |
FW12_1 | 14905611 | 14714091 | 46.11 | 0.04 | 96.84 | 13383604(90.96%) |
FW12_2 | 10853023 | 10724071 | 46.13 | 0.04 | 96.58 | 9603058 (89.55%) |
DW24 | 15461231 | 15289907 | 46.51 | 0.04 | 96.68 | 13912721(90.99%) |
FW24_1 | 15748199 | 15529280 | 46.45 | 0.04 | 96.72 | 13832709(89.08%) |
FW24_2 | 12921595 | 12747599 | 46.01 | 0.04 | 96.60 | 11423440(89.61%) |
DW48 | 11949074 | 11785699 | 46.70 | 0.04 | 96.54 | 10655203(90.41%) |
FW48_1 | 11187930 | 11038671 | 46.63 | 0.04 | 96.58 | 10023240(90.80%) |
FW48_2 | 15715268 | 15512388 | 46.16 | 0.04 | 96.63 | 14021279(90.39%) |