Table 1.
Significant SNPs identified in the association analysis using GenABEL
| Chromosome | Position | p Valuea | |
|---|---|---|---|
| Bone area at the ischium | |||
| OAR6_40855809 | 6 | 36655091 | 2.63E-09 |
| OAR6_40277406 | 6 | 36073405 | 4.66E-09 |
| OAR6_40311379 | 6 | 36104954 | 5.19E-09 |
| DU178311_404 | 6 | 36839547 | 4.58E-08 |
| OAR6_42576838 | 6 | 38310652 | 9.24E-08 |
| OAR6_40955920 | 6 | 36750972 | 3.52E-07 |
| OAR6_45662944 | 6 | 40975597 | 9.51E-07 |
| OAR6_45285663 | 6 | 40594243 | 1.53E-06 |
| s71628 | 6 | 29009593 | 1.59E-06 |
| OAR6_41558126 | 6 | 37334387 | 2.36E-06 |
| OAR6_41424992 | 6 | 37203894 | 4.43E-06 |
| OAR1_50287726 | 1 | 48393355 | 1.02E-05 |
| OAR6_32516276 | 6 | 28676510 | 1.12E-05 |
| OAR6_43292772 | 6 | 38906528 | 1.57E-05 |
| OAR6_37176737 | 6 | 33197652 | 1.69E-05 |
| Bone weight | |||
| OAR6_40855809 | 6 | 36655091 | 5.55E-08 |
| OAR6_40277406 | 6 | 36073405 | 1.12E-06 |
| OAR6_40311379 | 6 | 36104954 | 1.46E-06 |
| OAR6_41558126 | 6 | 37334387 | 5.75E-06 |
| OAR6_37176737 | 6 | 33197652 | 1.49E-05 |
| OAR6_45662944 | 6 | 40975597 | 2.06E-05 |
| OAR6_41424992 | 6 | 37203894 | 2.16E-05 |
| s17946 | 6 | 37164263 | 2.34E-05 |
| Fat area at the 8th thoracic vertebra accounting for live weight | |||
| OAR6_40955920 | 6 | 36750972 | 3.37E-06 |
| DU178311_404 | 6 | 36839547 | 3.43E-06 |
| OAR6_40311379 | 6 | 36104954 | 4.94E-06 |
| OAR6_40277406 | 6 | 36073405 | 5.57E-06 |
| Fat weight accounting for live weight | |||
| DU178311_404 | 6 | 36839547 | 1.23E-06 |
| OAR6_40311379 | 6 | 36104954 | 4.37E-06 |
| OAR6_40277406 | 6 | 36073405 | 4.38E-06 |
| OAR6_40855809 | 6 | 36655091 | 1.16E-05 |
| OAR6_40955920 | 6 | 36750972 | 1.65E-05 |
| OAR6_42576838 | 6 | 38310652 | 2.10E-05 |
| Muscle density at the 8th thoracic vertebra | |||
| s66995 | 1 | 275593974 | 7.28E-07 |
| s45224 | 1 | 275482364 | 4.50E-06 |
| s45240 | 16 | 5438002 | 1.26E-05 |
| Killing out percentage | |||
| DU178311_404 | 6 | 36839547 | 1.61E-05 |
| Bone proportion | |||
| s75746 | 3 | 69399949 | 3.89E-06 |
aThe genome-wide significance threshold corresponded to a p value less than 1.24 × 10−6 and the suggestive significance threshold corresponded to a p value less than 2.48 × 10−5