Table 2.
Candidate CO2 sensitive genes which were identified as differentially expressed in a transcriptome dataset previously published comparing cells at high vs. low CO2 concentrations using RNA-seq*.
| Metabolic pathway or biological process Description | Candidate CO2 sensitive genes | |
|---|---|---|
| Complemented network (present work) | Chang et al., 2011 | |
| Mitochondrial transport | MIT28 | |
| PTB12 | ||
| PTB4 | ||
| PTB2 | ||
| Phenylalanine, tyrosine, and tryptophan biosynthesis | AST4 | |
| Carbon fixation | MDH5 | RBCS1 |
| Pentose phosphate pathway | TAL1 | RPE1 |
| RPE1 | ||
| RPI1 | ||
| Transport, chloroplast | DAT1 | |
| NAR1.2 | ||
| Oxidative phosphorylation | NDA3 | |
| IPY1 | ||
| IPY3 | ||
| Glycolysis, gluconeogenesis, valine, leucine, and isoleucine degradation | PGK1 | PGK1 |
| Extracellular transport | PTA3 | |
| PTA4 | ||
| Glycine, serine, and threonine metabolism | GCSP | |
| THS1 | ||
| Glyoxylate metabolism | GLYK | |
| Prphyrin and chlorophyll metabolism | GSA | |
*
Transcriptome dataset previously published (Fang et al., 2012).