Skip to main content
. Author manuscript; available in PMC: 2016 Dec 1.
Published in final edited form as: Prostaglandins Leukot Essent Fatty Acids. 2015 Sep 14;0:13–20. doi: 10.1016/j.plefa.2015.08.004

Table 3.

Relative differences in PUFA concentrations (mg/ml) by FADS genotypes compared to the reference genotype in NC1 and NC2a,b,c.

SNP Cohort Genotype LA AA LA:AA ALA DHA EPA ALA:DHA ALA:EPA
FADS1-FADS2 rs3834458 NC1 TTd 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Tdel 1.054 0.922 1.142 1.243 1.019 1.004 1.259 1.122
Deldel 1.041 0.835 1.253 1.213 0.934 0.982 1.282 1.359
P-value 0.154 0.004 <0.001 0.133 0.915 0.970 0.165 0.256
NC2 TTd 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Tdel 1.044 0.933 1.106 1.011 1.019 1.014 0.987 1.000
Deldel 1.120 0.799 1.426 1.064 0.940 1.023 1.244 1.036
P-value 0.002 <0.001 <0.001 0.017 0.517 0.206 0.028 0.358
FADS2 rs174575 NC1 CCd 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
CG 1.019 0.982 1.055 1.153 1.081 1.046 1.106 0.914
GG 1.075 0.858 1.260 0.931 0.949 0.979 0.941 0.961
P-value 0.399 0.118 0.002 0.393 0.664 0.538 0.694 0.743
NC2 CCd 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
CG 1.024 0.988 1.036 1.002 1.000 1.001 1.002 1.001
GG 0.991 0.872 1.122 0.991 0.924 0.985 1.088 1.005
P-value 0.288 0.025 0.342 0.842 0.371 0.680 0.483 0.966
a

NC1, Nutrition Cohort 1; NC2, Nutrition Cohort 2; LA, linoleic acid; AA, arachidonic acid; ALA, α-linolenic acid; del=one base-pair deletion.

b

We present relative difference in PUFA concentrations by genotype compared to the mean concentration in homozygote carriers of the reference genotype. Therefore values greater than one show an average increase compared to the reference SNP and values less than one show an average decrease compared to the reference SNP. Bolded P-values, derived from unadjusted ANOVA, identify groups that differ significantly by genotype.

c

rs3834458 is FADS1-FADS2 intergenic (NCBI).

d

Reference genotype.