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. 2015 Dec 15;28(1):102–129. doi: 10.1105/tpc.15.00496

Table 3. Genes Induced in Systemic Tissue of sid2 but Not in Col-0.

Pos. AGI Code Name Gene Name/Description Mean Expression Value
Fold Change (Log2)
Col-0 M Col-0 P sid2 M sid2 P Col-0 P/M sid2 P/M
1 At5g24770 VSP2 VEGETATIVE STORAGE PROTEIN2 2.9 7.6 10.4 1108.4 1.1 6.6*
2 At5g24780 VSP1 VEGETATIVE STORAGE PROTEIN1 0.8 1.9 1.8 260.4 0.7 6.5*
3 At4g16590 CSLA01 CELLULOSE SYNTHASE-LIKE A01 0.8 1.2 1.6 133.2 0.3 5.7*
4 At1g76790 IGMT5 INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE5 0.6 0.4 1.8 116.5 −0.2 5.4*
5 At4g17470 α/β-Hydrolase superfamily protein 1.1 2.6 2.7 148.8 0.8 5.3*
6 At2g24210 TPS10 TERPENE SYNTHASE10 0.1 0.5 0.5 54.8 0.4 5.3
7 At3g11480 BSMT1 BENZOIC ACID/SALICYLIC ACID METHYLTRANSFERASE1 0.1 0.6 0.1 40.9 0.6 5.2*
8 At1g51780 ILL5 IAA-LEUCINE RESISTANT (ILR)-LIKE5 0.0 0.4 0.1 27.8 0.5 4.8*
9 At4g13410 CSLA15 CELLULOSE SYNTHASE LIKE A15 3.8 1.0 2.6 95.5 −1.3 4.7*
10 At1g24070 CSLA10 CELLULOSE SYNTHASE-LIKE A10 1.3 1.0 1.4 55.0 −0.2 4.5*
11 At3g28220 TRAF-like family protein 26.3 6.5 31.2 686.5 −1.9* 4.4*
32 At3g28290 Sequence similarity to integrins 2.4 0.5 1.9 28.9 −1.2* 3.4*
33 At3g28300 Sequence similarity to integrins 1.9 0.5 2.0 29.3 −0.9* 3.3*
41 At1g52000 Mannose binding lectin superfamily 28.5 6.6 33.4 306.8 −2.0* 3.2*
70 At2g43550 Scorpion toxin-like knottin superfamily 11.8 2.1 30.5 146.1 −2.0* 2.2*
91 At5g02940 Protein of unknown function 109.2 32.0 148.3 464.3 −1.7* 1.6*

A total of 104 genes were identified with significant Psm-induced upregulation in distal leaves of sid2 but not Col-0 plants (Figure 3A). The genes were listed in descending order according to their sid2 P/M ratios. The 10 genes with highest P/M ratios in sid2 and all genes significantly downregulated in Col-0 (SAR genes) from this group are depicted. The position of each gene in the list is indicated. Asterisks indicate significant changes between Psm and mock treatments (FDR < 0.01).