Table 4.
Results of regularized DFAs (λ = 0.1, γ = 0.1) assigning individuals to localities of origin for each lineage separately
| Λa | dferror b | P c | Initiald | LOOCVe | k f | |
|---|---|---|---|---|---|---|
| Clade A | 0.13 | 71.4 | <0.003 | 100.0 | 44.7 | 4 |
| Clade B | 0.20 | 36.0 | <0.031 | 100.0 | 61.3 | 3 |
| Clade C | 0.03 | 240.9 | <0.0001 | 98.4 | 42.6 | 7 |
| Clade D | 0.21 | 40.0 | <0.017 | 97.0 | 54.6 | 3 |
| Clade E | 0.07 | 33.0 | <0.0001 | 100.0 | 24.3 | 4 |
| Clade N | 0.02 | 975.5 | <0.0001 | 97.1 | 25.6 | 14 |
| Clade S | 0.01 | 1128.3 | <0.0001 | 97.3 | 37.0 | 17 |
Wilk's Lambda value.
Degrees of freedom.
P‐value.
Initial rate of correct classification to locality within clade.
Cross‐validated rate of correct classification to locality within clade.
Number of localities.